Verrucosispora sp. NA02020: HUT12_02945 Help Entry HUT12_02945       CDS       T06958                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism ver  Verrucosispora sp. NA02020 Pathway ver03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:ver00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     HUT12_02945  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ver03400]     HUT12_02945 Enzymes [BR:ver01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      HUT12_02945 DNA repair and recombination proteins [BR:ver03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      HUT12_02945 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol Motif Other DBs NCBI-ProteinID:  QKW11843 UniProt:  A0A7H8K5Q8 LinkDB All DBs Position 627774..628688 Genome browser AA seq 304 aa AA seqDB search MPSERLRVDVAGRTLELSNLDKLLYPKAGFTKGEVIDYYTRISPVLLPHLHDRALTRIRY PNGVEGNSFFEKNAPAATPSWVHVETLPAPGSTKGRETIDYVVADDLPTLVWLANLAALE LHTPQWKVGEHPDLMVVDLDPGPPATLRQCCRVALLLRERLAADGVDCYPKTSGKKGMQL CCPIAGTQSADDVSGYARRIAQELEREHPKLIVSKMARNLRPGKVFIDWSQNSAAKTTVA PYSLRAQPVPAVSTPLTWDEVEAGAAGRRPSTKPYTASEVLERVEEYGDLLAPLLTPGRA LPSA NT seq 915 nt NT seq  +upstreamnt  +downstreamnt atgccgagtgagcggctccgggtcgacgtcgccggacgcaccctggagctgtcgaacctg gacaagctcctctacccgaaggccggcttcaccaagggcgaggtgatcgactactacacc cggatctcgccggtgctgctgccgcacctgcacgaccgggcgctgacccggatccgctac ccgaacggggtggagggcaactccttcttcgagaagaacgcccccgctgccacgccctcc tgggtgcacgtcgagacgttgcccgcgcccggttcgacgaagggccgggagaccatcgac tacgtggtcgccgacgacctgcccaccctggtctggctggccaacctcgccgccctggaa ctgcacaccccgcagtggaaggtcggcgagcatccggacctgatggtggtcgacctggac cccgggccaccggccaccctgcggcagtgctgccgggtggcgctgctgctgcgcgaacgg ctggccgctgacggggtggactgctatccgaagacctccggcaagaagggcatgcagctc tgctgcccgatcgccggcacccagtccgccgacgacgtgtccgggtacgcccgacggatc gcccaggagttggaacgcgagcacccgaagctgatcgtgtcgaagatggcgaggaacctc cggcccggcaaggtgttcatcgactggagtcagaacagcgcggcgaagacgacggtggcc ccgtactcgctgcgggcacagccggtgccggcggtgtcgacgccgttgacctgggacgag gtggaggcgggcgcggcgggcaggcgaccgtcgacgaagccgtacacggcctcggaggtg ctggagcgggtcgaggagtacggcgacctccttgcgccgttgctcacacccggccgcgcg ctgccttcggcgtaa

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