Vibrio antiquarius: VEA_003967
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Entry
VEA_003967 CDS
T01107
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vex
Vibrio antiquarius
Pathway
vex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VEA_003967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vex03400
]
VEA_003967
Enzymes [BR:
vex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
VEA_003967
DNA repair and recombination proteins [BR:
vex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VEA_003967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
YozE_SAM_like
Motif
Other DBs
NCBI-ProteinID:
ACY52127
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All DBs
Position
1:2607318..2608124
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AA seq
268 aa
AA seq
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MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEAVEAMGYKVYFHGQK
AHYGVAMLCKQEPLHVQKGFPTDNEEHQKRMIMATFLNENGEKVTVLNGYFPQGDNISHE
TKFPYKRQFYKDLMTYLNDHHNSDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF
QPEEREWLKTLLDWGFEDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAQ
KCIDSGIDYELRGIEKPSDHAPIWSTFK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatcagctttaacatcaatggactacgtgcgcgactgcaccaactccaagcg
ctaatcgacaaacaccaaccagatgtgattggccttcaggaaattaaagttcacgatgaa
gcattcccgattgaagctgtcgaagccatgggctacaaagtgtatttccatggtcaaaaa
gcgcattacggcgtcgcaatgctttgtaagcaagaacctctacacgtacaaaaagggttc
ccgacggataacgaagagcaccaaaagcgcatgatcatggcaacgtttttaaatgaaaac
ggcgaaaaggtcacggtgctaaacggctacttccctcaaggggataacatcagccacgaa
acaaaattcccatacaaacgtcagttttataaagatcttatgacctacctaaacgatcat
cacaatagtgacgagcaattgattgttatgggtgacatcaacatcagccctattgatgca
gatatcggtatcggcgaaccaaaccgtaagcgttggctaaaaacaggtaaatgttcattc
caaccggaagagcgcgaatggctgaaaaccttgctagattggggctttgaggacaccttc
cgcaagctatatccagaagtgaacgatcaattctcgtggtttgattatcgctctcgcggg
tttgatgataaccgaggcctacgaattgatgtcattttggcgaccccttctctcgcgcaa
aaatgtattgactcggggatcgattatgaattacgcggtattgaaaaaccttcagaccac
gctccaatttggtcgacgttcaagtaa
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