Vitreoscilla filiformis: VITFI_CDS2152
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Entry
VITFI_CDS2152 CDS
T04960
Name
(GenBank) Exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vff
Vitreoscilla filiformis
Pathway
vff03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VITFI_CDS2152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vff03400
]
VITFI_CDS2152
Enzymes [BR:
vff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VITFI_CDS2152
DNA repair and recombination proteins [BR:
vff03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VITFI_CDS2152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ASM77930
UniProt:
A0A221KGJ3
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All DBs
Position
2240292..2244041
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AA seq
1249 aa
AA seq
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MRPIAQPVHRPITMTSPPPGLLVLHGNRAEHLAQVLVEWLHRHPLAPLEEDVVLVQSNGM
AEWFKMAFAQQAGVCAATRVELPGRFQWRLYRQTLGRRQVPTHSPFDKTPLTWRLMQRLP
GLLHEPAFAPVAGFLQEGEEPERPLQLARRLADLFDQYQIYRADWLQAWAEGRDVLPRAD
GTAPDVPDDQRWQPALWRELLNGDHGLSERERAALRPELHARVVATLRSESETAAPLPRR
VVLFGMTHLPLALLELLAALATRSQVLLALPNPCRFHWADIIDGRELLRQQRRRQPLRAG
RDLAAVSLEEMHAHAHPLLASWGRQSRDFIRQLDAFDDTERLHSQHGLGRELARVDLFDD
EQDQPSAHLLAQVQARIRDLVPLPEHAQAAREAGQGGDSGQALRDDDRSVVFHQAHSAMR
ELEVLHDQLLRLLADPPADASGQHPPLAPRDIVVMVPDIAAFEPAIRAVFGQYPKHDPRH
IPFDIADLSARDTSPLMAALEWLLRLPQQRCTFSELCDLLDVPALARRFGLKPEALPQLT
HWMAGAGLRWGVDVQQRGLLKLDACGDANSALWALRRMLLGYASGAGPAFAEIEPHAEVG
GLEAELAGSLALLLERLAHWWALLREPATPSAWAERARALLLDFFTATDDSDRATLAALD
EALSAWLNACEQAGFESTVPLAVAREAWLESLNEPTLNRRFRAGGVTFCTLMPMRAIPFD
VVCLLGMNEGDYPRRAPRIDFDLMGLPGHARPGDRSRRDDDRQLMLEALLSARRVLYVSW
AARNPRDNSEQPPSVLVSQLRDYLCAGWGDAAVKDRTTEHPLQPFSRRYFEAGQTLFTYA
SEWRLAHQAGAPSPQPSPTRGEGDMPAKPLPPGGGGVGERGLPPFTPDPAAPLSLRRLAA
FVRQPVRAFFRERLSVWFDSTDSEVQDEEAFSLAGLEAHSLMQELLDEAQSQLQTSPLKA
VPDALPRVVDALLTRTRRAGRLPLGGLGELARQELAETLSTVLDVWLGVQAAHAEALPHR
PLAFESGDVRLQDWLTGLHRSADHSVPVVMLLSASRLCGKSNRNGLVPRKDALLEAWLLA
LVAAACGQPLQLILVGRDATLTATSPPPDEAAATLKRLLTAWRCGQQAPLPVARRTALAW
LERAATLSAQLEGDVLPHELEPAFMDARSAYEGGFAQAGEVQQDACLARLFPDFEHLLNA
SADDEHGHPLRFADWATWLYEPLRQWVEEGVSAEAHPSPAADLTSGTDA
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccccattgcccagccggttcaccgacccatcaccatgacctctccccctcccggc
ctcctcgtcctccacggcaaccgcgccgaacacctcgcccaagtcctcgtcgagtggctg
caccgccacccgctggcgccgctggaagaagacgtggtgctggtgcagagcaacggcatg
gccgagtggttcaagatggccttcgcccagcaagccggtgtgtgcgccgccacgcgggtc
gagctgccggggcgcttccagtggcggctgtatcgccagacgctgggccggcgccaagtg
cccacccattcaccgttcgacaaaacgcccctgacctggcgcttgatgcagcgcctgccc
ggcttgctgcacgaaccggccttcgcccccgtggccggttttctgcaagaaggtgaggag
cccgagcgcccgctgcaactggcccgccgcctggccgatttgttcgaccaatatcagatt
taccgcgccgattggctgcaagcctgggccgaaggccgcgatgtgctgccccgtgccgac
ggcaccgcccccgacgtgcccgacgatcagcgctggcaacccgccctgtggcgcgagctg
ctcaacggcgatcacggcttgagcgaacgcgaacgcgccgccctgcgccccgaactgcac
gcccgcgtggtggccacgctgcgcagcgagagcgagaccgccgccccgctgccccggcgc
gtggtgctgtttggcatgacccacttaccgctggccttgctggagctgctcgccgccctg
gccacacgttcccaagtgctgctggccttgcccaacccctgccgcttccattgggcggac
atcatcgatggccgcgaactgctgcgccagcaacgccgtcgccagcctttgcgggcgggg
cgcgatctggccgccgtctcgctggaagaaatgcacgcccacgcgcacccgctgctggcg
tcctggggccgacagagccgcgatttcatccgccaactggacgccttcgacgacaccgag
cgcctgcacagccagcacggtttgggccgcgagctggcgcgtgtggatctgttcgacgac
gagcaggatcaacccagcgcccacttgctggcccaggtgcaagcgcgcatccgcgacttg
gtaccgctgcccgagcacgcccaagcggcccgcgaagcggggcagggcggtgacagcggc
caggcgctgcgcgatgacgaccgctcggtggtgttccaccaagcccacagcgccatgcgc
gagctggaagtgctgcacgaccaactgttgcgcctgctcgccgacccgcccgccgacgcc
agcggccagcacccgccgctggccccgcgtgacatcgtggtgatggtgccagacatcgcc
gcgtttgagcctgccatccgcgccgtgttcggccaatacccgaagcacgatccgcgccac
attccgttcgacatcgccgacttgagcgcccgcgacaccagcccgctcatggccgcgctg
gagtggctgctgcgcttgccgcaacagcgctgcaccttcagcgagctgtgtgacttgctg
gacgtgcccgcgctggcgcggcgctttggcctgaagcctgaagccctgccgcagctcacg
cactggatggccggcgcggggctgcgctggggggtggacgtgcaacagcgcggcctgctc
aagctggacgcttgcggcgacgccaacagcgccctctgggcgctgcgtcgtatgttgctg
ggttacgccagcggtgctgggccggcgtttgccgagatcgaaccgcacgccgaagtcggt
gggctggaggccgagctggcgggctcgctcgcgctgctgctggagcgcctggcgcactgg
tgggcgctgctgcgcgaaccggccacgcccagcgcctgggccgaacgcgcccgcgccctg
ctgctggacttcttcaccgccaccgacgacagcgaccgcgccaccctggccgcgttggac
gaagccctgtcggcttggctgaacgcttgcgaacaagccggcttcgagagcaccgtgccg
ctggctgtggcgcgtgaggcgtggctcgaatcgctgaacgaaccgacgctgaatcggcgt
ttccgtgccggtggcgtcaccttctgcacgctgatgccgatgcgtgccattccgttcgac
gtggtgtgcctgctgggcatgaacgagggcgattacccgcgccgcgccccgcgcatcgat
tttgacctgatgggcctgcccggccacgcccgccccggcgaccgctcccgccgcgacgat
gaccgccagttgatgctggaagcgctgctctccgcccggcgcgtgctgtatgtgagctgg
gccgcccgcaacccgcgagacaacagcgagcagccgccctcggtgttggtgtcgcagttg
cgggattacttgtgcgccggttggggcgatgccgccgtgaaagaccgcaccaccgagcac
ccgttgcaaccgttcagccggcgttatttcgaggcggggcagacgctgtttacctatgcg
agtgagtggcggttggcgcatcaagcgggagccccctctccccagccctctcccacgagg
ggagagggagacatgccagcaaagcccctcccccctggcgggggaggggttggggagagg
gggcttccccccttcacccccgacccagcagcgccgttgtcgctgcgtcggttggccgcg
tttgtgcgccagcccgtgcgcgcttttttccgcgagcgcctcagcgtctggtttgacagc
accgacagcgaagttcaagacgaggaagccttcagcctcgccggtttggaagcccacagc
ttgatgcaagagctgctggacgaagcgcaatctcaactgcaaaccagccccctcaaagcc
gtacccgacgccctgccgcgtgtggtggacgcgctgctgacccgcacccgccgcgccggg
cgcctgcccctgggtggattgggcgagctggcgcgtcaagagttggcggaaacgctgtcc
acggtgctcgacgtgtggctgggcgttcaagcggcgcacgccgaagcgctgccgcaccgc
ccgctggctttcgaatccggcgatgtgcgcttgcaagattggctcaccggcctgcaccga
tcggctgaccactccgtgcccgtggtgatgctgttgagcgccagccggctgtgcggcaag
tccaaccgaaacggcctggtgccgcgcaaagacgcgctgttggaggcgtggttgctggca
ctggtggcggcagcctgcggccaaccgctgcaactgatcttggtggggcgcgatgccacg
ctcaccgccacttcacctccgccagacgaggccgccgccaccctgaaacgcctgctgacg
gcctggcgctgcggccaacaagccccgctgcccgtggcgcggcgcacggcgttggcgtgg
ttggagcgagcggcgacgctgtccgcccaactggagggcgacgtgctgccgcacgagctg
gaaccggcgttcatggacgctcgcagcgcctacgaaggcggttttgcccaggccggcgag
gtgcagcaggatgcgtgcttggcccgcctgttccccgatttcgaacacctgctgaacgcc
tctgccgacgatgaacacggccaccctctgcgcttcgccgattgggccacctggctttac
gaacccctgcgccagtgggttgaagagggggtgagcgccgaagcccaccccagccccgct
gccgacctcacctccggaaccgacgcatga
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