Aliivibrio fischeri ES114: VF_0152
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Entry
VF_0152 CDS
T00236
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00540
Lipopolysaccharide biosynthesis
vfi01100
Metabolic pathways
vfi01250
Biosynthesis of nucleotide sugars
Module
vfi_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VF_0152 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vfi01005
]
VF_0152 (rfaD)
Enzymes [BR:
vfi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VF_0152 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vfi01005
]
Core region
VF_0152 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
ThiF
Polysacc_synt_2
NAD_binding_4
KR
adh_short
Phage_T7_Capsid
NAD_binding_10
Ldh_1_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AAW84647
UniProt:
Q5E8J9
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All DBs
Position
I:complement(170815..171756)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKSLNNKGFNDILVVDNLKDGKKFKNLVDLDITDYMDKEDFITQI
MAGDDFGPIEAIFHEGACSATTEWDGKYIMMNNYEYSKELLHFCIEREIPFLYASSAATY
GETDTFIEERAYEGALNVYGYSKQQFDNYVRRLWADAEEHNETLSQITGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGDNPKLFEGSDEFKRDFVYVGDVAAVNLWFLENGVSGIYNC
GTGRAEPFRAVAEAVIKHHGKGEVETIPFPEHLKGAYQEFTQADLTKLRAAGCDVEFKSV
ADGVAEYMAMINK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgtaactggcggcgctggcatgattggcagcaacattgttaagtctttaaat
aacaaaggttttaacgacattttagtggttgataacctaaaagatggtaaaaaattcaag
aacctagtggatcttgatatcactgattacatggataaagaagacttcattacgcaaatt
atggcgggtgatgactttggtcctatcgaagctattttccatgaaggtgcttgctctgct
acaactgagtgggatggcaaatacattatgatgaacaactatgagtactctaaagagttg
cttcatttctgtattgagcgtgaaattccattcctttacgcatcatcagcagctacttac
ggtgaaacagatacgtttatcgaagagcgtgcatacgaaggtgctttaaacgtttacggt
tattctaaacaacagtttgataactacgttcgtcgcctatgggctgatgctgaagagcac
aacgaaacgctatctcaaattacgggtttccgttacttcaatgtgtatggtcctcgtgaa
caacataaaggttctatggcttcagttgctttccatttaaataaccaaatgaatgcgggc
gataaccctaaactgtttgaaggtagtgacgagtttaaacgtgatttcgtttacgttggt
gatgttgctgcagttaacctttggttcttagaaaatggcgtatctggtatttataactgt
ggtactggccgtgctgaaccattccgcgctgttgctgaagcggtaattaaacaccacggt
aaaggtgaagtggaaactatcccattccctgagcacctaaaaggcgcataccaagaattt
actcaagctgatctaactaagcttcgtgctgctggttgtgatgttgagtttaagtcagta
gctgatggtgttgctgaatatatggcgatgattaataagtag
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