Aliivibrio fischeri ES114: VF_1064
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Entry
VF_1064 CDS
T00236
Symbol
gadA
Name
(GenBank) glutamate decarboxylase A, PLP-dependent
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
vfi
Aliivibrio fischeri ES114
Pathway
vfi00250
Alanine, aspartate and glutamate metabolism
vfi00410
beta-Alanine metabolism
vfi00430
Taurine and hypotaurine metabolism
vfi00650
Butanoate metabolism
vfi01100
Metabolic pathways
vfi01110
Biosynthesis of secondary metabolites
vfi01120
Microbial metabolism in diverse environments
vfi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VF_1064 (gadA)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VF_1064 (gadA)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VF_1064 (gadA)
00430 Taurine and hypotaurine metabolism
VF_1064 (gadA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VF_1064 (gadA)
Enzymes [BR:
vfi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
VF_1064 (gadA)
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Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AAW85559
UniProt:
Q5E5Y7
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All DBs
Position
I:1176030..1177424
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AA seq
464 aa
AA seq
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MPLHSKNAVRDDLLDDIYSSADLSLSMPKYKMPEQEHDPRHAYQVIHDELMMDGNSRQNL
ATFCQTWVEDEVHKLMDECIDKNMIDKDEYPQTAELESRCVHMLADLWNSPDAENTLGCS
TTGSSEAAMLGGMALKWAWREKMKKLGKPTDKPNMICGPVQVCWHKFARYWDIELREIPM
EGDRLIMTPEEVIKRCDENTIGVVPTLGVTFTCQYEPVKAVHEALDKLQEETGLDIPMHI
DAASGGFLAPFCDPDLEWDFRLPRVKSINASGHKFGLSPLGVGWVIWRDASALHEDLIFN
VNYLGGNMPTFALNFSRPGGQIVAQYYNFLRLGKEGYRKIHQACYDTAVYLSSEIEKLGM
FEIIYDGKGGIPAMSWSLKEGVDPGFNLFDLSDRIRSRGWQIAAYAMPPKREDLVIMRIL
VRHGFSRDQADLLVADLKHCVEFFAKHPISHGSDELESSGFNHG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcattccaaaaacgcagtcagagatgatcttcttgatgatatttattcatca
gctgacctttcgttatccatgccaaaatataaaatgcctgaacaagaacatgacccacgt
catgcctaccaagtcattcatgatgagctcatgatggatggtaattctcgacagaactta
gcaacgttttgccaaacttgggttgaagatgaagtccataaattaatggatgaatgtatc
gataaaaatatgatcgataaagatgaataccctcaaactgctgaattagaatctcgctgt
gtgcatatgctagcggatttatggaactctcctgacgcagaaaacacactaggttgttcc
actacaggttcaagtgaagccgctatgctaggtggtatggcattaaaatgggcttggcga
gaaaaaatgaaaaaacttggcaaaccaacagataagccaaatatgatctgtggtcccgtt
caagtatgttggcataaatttgcacgttattgggatattgaattacgtgagatcccaatg
gaaggcgatcgcttgatcatgacgcctgaagaagtgattaaacgttgtgatgaaaatacc
attggtgttgttccaacactgggggtgacttttacttgtcaatatgagcctgtgaaagcg
gtacatgaagcgctagataagttacaagaagagacgggtttagatattccaatgcacatt
gatgcggcgagtggtggtttcttagctccgttctgtgatcctgatttagagtgggacttc
cgtcttcctcgagttaaatcgattaatgcatcaggtcataaatttggcctaagcccacta
ggtgtgggttgggtaatttggcgtgacgcatcagccttgcatgaagatttgatttttaat
gtgaactatttaggtggcaatatgccgacctttgcattgaacttctctcgcccaggtggc
caaattgtagcgcaatactacaatttcctacgtttaggaaaagaagggtatcgtaagatc
caccaagcgtgttatgacactgctgtttatttatcatctgaaattgaaaaactgggtatg
tttgaaattatctatgatggtaaaggtggtattccagcaatgagttggtcattgaaggaa
ggagttgatcctggttttaatttgtttgacctatcggatcgaattcgttctcgtggttgg
caaattgcggcttatgcaatgccaccaaaacgtgaagatttagtcatcatgcgtatttta
gtacgtcatggattcagtcgagatcaagcggatttattggttgcggacttaaaacattgc
gttgagttttttgctaagcatcctatttcccatggtagtgatgagttggaatcatcagga
tttaaccacggctaa
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