Aliivibrio fischeri ES114: VF_A1034
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Entry
VF_A1034 CDS
T00236
Symbol
sypO
Name
(GenBank) chain length regulator (capsular polysaccharide biosynthesis)
KO
K25590
protein tyrosine kinase modulator
Organism
vfi
Aliivibrio fischeri ES114
Brite
KEGG Orthology (KO) [BR:
vfi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vfi02000
]
VF_A1034 (sypO)
Transporters [BR:
vfi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VF_A1034 (sypO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzz
GNVR
DUF1664
MreB-like_C
GapR_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
AAW88104
UniProt:
Q5DYP2
LinkDB
All DBs
Position
II:1167447..1168946
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AA seq
499 aa
AA seq
DB search
MITLSQRIFIILESAWRRRYLIVLPIILMPFIGLTVAKLAPKHYDSHTSMLIQETAKMNP
FLEDLAVSTMLKERLSALQTLLHSRHILGSVAEERGYIHESMSPQAIDNEINKLSANLSV
SMAGKDLIRIDYRANNPDGMKDTLEAVSRHFTEQLLAPERSSMKDSSKFLSDNIEFRRQE
LDAAEEKLAEFKSQENTVLPEMQITSLDRLTKLKQRLYERQAELAGAKKRLGSIDLQLSK
TNPVIGKIEEQIIRIRGELTLLQAKYTPQHSKVQGKLRNLNRLEEERSRLLSQTQPGLSS
EQLWDIASSNSVEDLAKAPPILLSQLEELQQATSKVDALTEETRVLESMIKDIELQASTF
GQNEKVLYQLQRDLALKRELYNDLVERFEMAKLTRSLGVFEQEKRVKIIDRPYTPSGPSN
LPTILYAIAGVIGGIGFGIGMAIIAELCDTSIRRKDEIATLSTSPVLSRIPPQPVKCFNL
SEDTHSTTNNLLSSMSKAN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatcactttaagccaacgtatttttattattttagaatcagcatggcgtcgtcgctat
ttgattgtcttacccattatattaatgccttttattggactgactgttgctaagttagcc
cccaaacattatgactctcacaccagtatgttgatccaagaaacagcaaaaatgaaccca
ttcctagaggatttagccgtttcgaccatgctaaaagagcgattaagtgctttgcagact
ctgttacacagtcggcatatcttaggctcagttgcagaagaacgaggttatattcatgag
tcaatgtcccctcaagctattgataatgaaatcaataaactctctgctaacttatccgtc
agtatggctggtaaagatttaattcgtattgattatcgagcgaataaccctgatggaatg
aaagatacgctagaagcagtgagccgtcattttactgaacaacttttagcaccagagcgt
tcatctatgaaggattcaagtaaattcctctctgataacattgaatttcgtcgacaagaa
ttggatgccgcagaggaaaaattagccgaatttaagagccaagaaaataccgtattgcct
gaaatgcaaatcacaagtttagataggttaaccaaactaaaacaacgtttatacgaacga
caagctgagctagctggtgcgaaaaaacgcctaggctcaattgatcttcaactttcaaaa
accaatccagtaatcggtaaaatagaagaacaaatcatccgaattcgtggtgaactgact
ttattacaagccaaatacacccctcaacacagtaaggttcaaggaaagttacgtaattta
aaccgcctcgaagaagagcgctctcgcttactttcacaaactcaacctggcttaagtagt
gaacaattatgggacatagcaagtagcaacagcgtcgaagatttagcaaaagcgccacca
attcttctgtcccaattagaagagttacagcaagcaaccagtaaagttgatgcgttaaca
gaagaaacacgagttctcgaaagcatgatcaaggatattgagctacaagcatccacattt
ggacaaaacgaaaaagtactttatcaattacaacgagatctcgctcttaaacgtgaactc
tataatgatctagttgaacggtttgaaatggctaagctcactcgttcactcggggttttt
gaacaagaaaaacgagtcaagatcatcgatagaccgtatacacctagtggtccttcaaat
ttacccacgatcctatatgccattgcaggggttattggggggataggatttggcattgga
atggcgattatcgctgaattatgcgacacaagtattcgccgcaaagatgaaatcgctaca
ttaagcacatctcctgtattaagccgaataccaccgcaaccggtgaaatgcttcaattta
tcagaagatacacactcgacaacaaacaacctcctatcaagtatgtcaaaagccaattaa
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