Vibrio fluvialis: AL536_09800
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Entry
AL536_09800 CDS
T04379
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vfl
Vibrio fluvialis
Pathway
vfl02020
Two-component system
vfl02040
Flagellar assembly
vfl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL536_09800
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL536_09800
09142 Cell motility
02040 Flagellar assembly
AL536_09800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vfl02022
]
AL536_09800
02035 Bacterial motility proteins [BR:
vfl02035
]
AL536_09800
Two-component system [BR:
vfl02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
AL536_09800
Bacterial motility proteins [BR:
vfl02035
]
Flagellar system
Flagellar assembly proteins
Others
AL536_09800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
MCM
AAA_16
Mg_chelatase
HTH_20
MerR
HTH_28
HTH_24
HTH_11
AAA_19
DUF2089
AAA_7
AAA_3
FleQ
HTH_Crp_2
HTH_5
Sigma70_r4_2
HTH_10
SPAN
Motif
Other DBs
NCBI-ProteinID:
AMF93796
UniProt:
A0A109X2L4
LinkDB
All DBs
Position
2:455363..456769
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AA seq
468 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALVDTLALAGYEWLEADCAEDALVKLKTYPVDIVVSDVQMAGM
GGLALLRNIKQHWPNLPVLLMTAYANIEDAVSAMKEGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAVVADEKSLKLLALAEKVAKTDANVMVLGPSGSGKEVMSRYIHNASPRKDGP
FVAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSVKLDVRVLATSNRDLKSYVQEKKFREDLYYRLNVFPIAWPAL
CERKGDIEPLANHLVERHCKKLGLAVPKVSSAAIGKLLAYNWPGNVRELDNVIQRALILS
EQDNIDQEHILLEGLDWQDASSLQQVVESGEVATPEIKPVAEVDFAKAISSGAGLGGELR
DQEYAIIMETLVECHGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIPG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaagtcttaatcgttgaagatgacgaaggtctacgcgaagccctggta
gacaccctggctctggctggctacgaatggctggaggccgattgcgccgaggacgctttg
gtcaaactgaaaacctatccggtggatatcgtagtgtctgatgtgcagatggcaggcatg
ggtggtctggcgctgctgcgtaacattaaacaacattggccgaacttgcctgtgctgctg
atgacggcatacgccaacatcgaagatgcagtctcggcgatgaaagaaggcgcgattgac
tacatggcgaaaccttttgcgccggaagtgctgctgaacatggtgagccgatatgcaccc
gttaaatctgacgataacggtgatgcggtggtcgcggatgagaagagcctgaaactactg
gccttagcagagaaagtggctaaaacggatgccaacgtgatggttctgggccctagtggt
tcgggtaaagaagtgatgtcgcgttacattcacaacgcgtcaccgcgcaaagatggtccg
tttgtcgcgatcaactgtgcggcgattccggacaacatgttggaagccaccctgtttggc
tacgaaaaaggtgcgtttactggcgcagttcaggcctgtccgggtaagtttgaacaggct
cagggcggaacgattctgctggatgaaatcagcgaaatggatctcaacctgcaagcgaaa
ctgctgcgtgtgctgcaagaacgtgaggtggagcgtcttggcagccgcaagagcgtcaaa
cttgatgtgcgcgtgctggcaaccagtaaccgtgatcttaagtcgtatgttcaagagaaa
aaattccgtgaagacctgtactaccgcctgaacgtgttcccaatcgcctggcctgcgctg
tgcgagcgtaaaggtgacattgagccgctggccaatcatctggttgagcggcattgtaaa
aagctcggtctggcggtcccgaaagtctcgtccgcggcgattggcaagctgcttgcctac
aactggccgggtaacgtacgggaactcgacaacgtcattcagcgcgcgctgattttgagc
gagcaagacaacatcgatcaggagcacattctgctggaaggccttgattggcaggatgcg
tcgagcttgcaacaggttgtcgagagcggagaagtggccacaccggaaatcaaaccggtc
gctgaagtggattttgccaaagcaatcagcagcggcgcgggtctgggcggtgagctgcgc
gatcaggaatacgccatcatcatggaaactctggtggaatgtcacggtcggcgcaaagaa
atggctgaaaagcttgggattagtcctcgcacattacgctataaactggctaaaatgcgc
gatgcaggcattgatattcccggttaa
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