Viruses: 1496980
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Entry
1496980 CDS
T40000
Symbol
CCFVgp1
Name
(RefSeq) Cardamine chlorotic fleck virus; replicase
Virus
31711
Cardamine chlorotic fleck virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RdRP_3
RdRP_2
Motif
Other DBs
NCBI-GeneID:
1496980
NCBI-ProteinID:
NP_041884
RS:
NC_001600
UniProt:
Q65987
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Position
NC_001600:38..2359
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AA seq
773 aa
AA seq
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MDALLPEFLAHKLSRLVLKCFGIGSDEEAPQQIFVGEFPVWGGEIVPPQPEELNQLVIPR
KWVRSIGSSLNRVVLPPSSGVVASLEENCVAPFEEASVEQLEPASGDTGDLPRRKIRRRG
RFVAHAVCAAKLHFSGCPTQTLANRLAVSKWLVQYCTERNVIPSHTRIAVQEALPQVFLP
DGHDLKEVLDLHTEEAHDRRNALRKRGRHVRRWWVQLAMHPMTGRSWLRAWRRLTGLPDD
VAVQFVRXGCLRELVGRETAISRGEHPAMRVFPLAQPPKIRRIFHICGMGNGLDFGVHNN
SLNNLRRGLMERVFYVEDAQKELKPAPQPLPDAFAKLSGIRRKLVKLAGNHTPILREDYS
KLYKGRRATIYQNACESLADRACTQGGSAELKTFVKAEKINFTAKKDPAPRVIQPRDPRY
NIEVGKYLKCYEHHLYRAIDKMWCGPTVLKGYNVEEIGNIMSDAWNQFQKPCAIGFDMKR
FDQHVSVDALKWEHSVYNASFNCPDLAKMLTWQLKNKGVGRASDGYIKYQVEGCRMSGDV
NTAMGNCLLACSITRYLMKGIKSRLINNGDDCVVFFESGDMHEVRERLCRWIDFGFQCIA
EEPQYDLEKVEFCQMSPIYDGEGWVMVRNPRVSLSKDSYSTTQWGSVRDAASWLASIGEC
GMAIAGGIPIVQSYYNCLLRNFKHLARNTSKKKLDVSFNSGFSMLAQNGNRGSKEVSEAA
RYSFYVAFGYTPDEQRGLEGYYDNLALEAAWDPEGYDETLLNRWIINPSLTTP
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcttttaccggagtttctcgcccacaagctttcgcgtttagtgctcaaatgc
tttggtataggtagtgatgaggaagcaccccagcaaatctttgtaggggaattccccgta
tggggtggggaaatagtccccccccaaccggaggagctgaatcaactagtcattccccgt
aagtgggttaggtcaataggaagtagtcttaatagagtagtcttaccaccctctagtggg
gttgtcgcctcccttgaggagaactgtgtggcacctttcgaggaagctagcgtagaacag
ttagaaccagctagtggtgatactggtgacctccctaggaggaagataaggagacgaggg
cgattcgtcgcgcatgcggtgtgtgctgcaaagctgcacttcagcggttgccctacgcaa
acgctagccaaccggttggcggtgtcgaaatggctggtgcagtactgcactgaaagaaat
gttatacccagccatacgagaatagctgtgcaagaggctcttccacaggttttcctgccc
gatgggcacgacctgaaggaagttctggaccttcatactgaagaggcccacgacaggcga
aacgcgctccgcaagcgaggcaggcacgtacgtcgatggtgggttcaattagcaatgcac
cccatgactggcagatcatggctacgggcgtggaggaggcttaccggccttcccgacgac
gtggctgtgcaatttgtccgctaggggtgcttacgggaattggttgggcgagagactgct
atctctcggggggaacacccagccatgcgcgtattcccgttagcacagccccccaaaata
cgacgcatcttccatatctgtggaatgggcaatggtttagactttggagtccacaacaac
tcactcaacaatctgagaagaggtttgatggaacgagtcttttacgtcgaagatgcgcag
aaagaactgaaaccagccccccaacctctacccgacgcgttcgctaagcttagcggaatt
cggcgcaaattggtgaagcttgctggaaatcatacccctatccttagagaagactactct
aagttgtataagggcaggagagcaaccatctaccaaaatgcgtgcgaatcattagctgat
cgagcgtgtacacaaggcgggagcgctgagcttaaaaccttcgtcaaagctgagaagatt
aattttacggcgaagaaggatccggcacctagggttatccaacctagggatcctagatat
aacatagaggtagggaaatatctgaaatgctacgaacaccatctttacagagcaattgat
aagatgtggtgtggtccgacagtgttgaaaggttacaatgttgaggagatagggaacata
atgtcagacgcttggaaccaattccagaaaccgtgtgctataggctttgatatgaagaga
ttcgatcagcacgtttctgtagatgccctcaaatgggagcatagcgtctacaatgccagc
tttaactgtcccgatttggccaagatgctaacgtggcagctgaagaacaagggcgttggt
agggcttccgatggatacatcaagtaccaggtagaaggatgtagaatgtcaggtgatgtg
aatacagctatggggaactgtctcttggcttgttccatcactcgttatctaatgaagggg
attaagagcagactgatcaataatggagacgactgtgttgtgttctttgagagtggcgat
atgcatgaggtacgtgaaagactgtgccgttggatcgatttcggattccagtgcatcgcc
gaagaaccgcagtacgaccttgagaaggtagagttttgccaaatgtcacctatttatgat
ggcgagggatgggtcatggttaggaacccccgtgtaagcttatccaaagacagctacagc
acgacacaatggggcagcgtcagagacgcagccagctggttggcatctatcggagagtgc
ggcatggccattgcaggtggcataccaatcgtgcagtcatattacaattgtctgctaaga
aatttcaagcatttggcgcgaaatactagcaagaagaaattggatgtttcctttaactcg
ggattcagtatgttggcccaaaacggcaatcgggggtccaaagaggtttctgaagcagct
cggtactcattttacgtggctttcgggtacacccctgatgaacaaaggggactcgaaggc
tactatgataatctggcgttagaagcagcatgggaccccgagggttatgatgaaacccta
ctgaatagatggataatcaatccgagtctgacaactccgtaa
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