Viruses: 22109413
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Entry
22109413 CDS
T40000
Symbol
PPF1_42
Name
(RefSeq) Rhizobium phage vB_RleM_PPF1; non-homologous end-joining DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Virus
1498228
Rhizobium phage vB_RleM_PPF1
Taxonomy
SSDB
Ortholog
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GFIT
Vog
Vog cluster
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
22109413
NCBI-ProteinID:
YP_009099605
RS:
NC_025427
UniProt:
A0A068CDF3
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Position
NC_025427:27700..28746
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AA seq
348 aa
AA seq
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MTKPPKSKPLLRDADKPVRSRPRKARNPAQPNLPLDPMPDRVEPCLALLKARPPKGDDWV
YEIKWDGYRLSVHVEPTGIRILTRGGHDWTHRFPAIKQAALWLPVGTAILDGEAVVLDDQ
GRSDFGLLQQSLGGRGGKKSSSDAIFMAFDLLYFDGHDLRNSELGMRRHLLEDLVPAGEQ
GDIRLSEEIEADGDQLLASACEHGLEGIIAKRRGAPYRSGRGGDWLKIKCVQSDSFFIVG
YEISIAARGHIGSLLLAARKGDDLVYVGSVGTGFKESEAWKLRGMMDRIKRKTPPIAYAG
RRKDLVWLQPTLIAEIEYRAWTSDGKLRHSSYKGLRERQDNAAVYEFE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcctccgaagtccaaaccgctcctgcgggatgctgacaagccggttcgatcc
cggcctcgcaaagcgcggaatcctgcgcagccgaaccttcccctcgaccctatgccagat
cgcgttgaaccgtgtcttgcgctactgaaagcgagaccgccgaagggcgacgactgggtt
tatgaaatcaaatgggatggctatcgcctgtcggttcatgtcgagccgacgggcattcgc
atcctgacgcgcggcggccacgactggacacaccggttccccgcaatcaaacaagcggcc
ctgtggcttcctgttggcacggcaatcctcgacggcgaggccgtggttctcgacgaccag
ggccggtcggatttcggcctgctgcaacaatcactcggcggccgtggcggcaagaagagc
tcaagcgacgccatcttcatggcttttgatctactctatttcgacgggcacgatctccga
aactccgaactcggcatgcgccggcatctgctcgaggatctcgtgccggcaggcgagcag
ggcgatatccggctttcggaggagatcgaggccgatggcgatcagctgctcgcaagcgcc
tgcgagcatggccttgagggtatcatcgccaagcgcaggggcgcgccctatcgatccggc
cggggcggtgactggctcaaaatcaaatgcgtccagagcgacagcttcttcatcgtcggt
tacgagatctcgatagcggcgaggggtcatatcggatcgctgctgctcgctgcccgcaag
ggcgacgacctggtctatgtcggttcggtcgggacgggcttcaaggaaagcgaggcatgg
aagcttcgcgggatgatggacaggatcaagcggaagacgccaccgatcgcctatgccggc
cgtcgcaaggatctcgtctggctgcagccgacactgattgcggagatcgaatatcgggcg
tggacgagtgacggcaagttgcggcattcatcctataagggactgcgggagcggcaggat
aatgcggcagtttatgaatttgaataa
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integrated database retrieval system