Viruses: 26121862
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Entry
26121862 CDS
T40000
Symbol
ASK87_sRA11gp1
Name
(RefSeq) Rice necrosis mosaic virus; polyprotein
Virus
59500
Rice necrosis mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RdRP_1
Poty_PP
Poty_coat
Peptidase_C4
Helicase_C
DEAD
AAA_11
Peptidase_C107
Flexi_CP
AAA_30
Peptidase_C3
Motif
Other DBs
NCBI-GeneID:
26121862
NCBI-ProteinID:
YP_009175089
RS:
NC_028144
UniProt:
A0A0P0YQE3
LinkDB
All DBs
Position
NC_028144:181..7014
Genome browser
AA seq
2277 aa
AA seq
DB search
MATPPRVDDFIPEVFYKKQVDKLKELLKAWSSQTTVYHKLAGDRELLAFLMLSRALLNKL
SAYLEAEDKRCMVMALNADTVETLAVVRQALIGIKINFGSWPLEQGWMMMMKQLDSCLDE
SYTENAQSLKKAMQVVGMKLLAAKNRIEICERSVDNYGLNTTCYDRLRDIGSRVRDTILR
KPSSNIFPEEIRMSYFRALTTTLHLATQQFFLKALAYLCGIYQPLQWLFNFCVGTYAMCN
MFNISWLVVKWSLRTHFGKHWTIYAASFLVCVTTTCFWVLNQREKTYLQSAQKQRKFIGI
LAFCITVVYMFDVDMADALAANLGKITRLVGMYTDDYNGFANNATTWLQSGINSNQLSGV
QNTLAVVLNLDDEDTDGDGTVIESEDQLTFKAWASTNHLAGKQLVRPLQYDVQARYALNS
DNVEELSRQMCSERKQWSQVVGYTGSGKSTVLPVAYYNDLKSKIGRQHCILVCEPTQAAT
VNVVGGISHNLGTLVFGRHEKWENLGDKCIQVMTYGSALASQARDSSFLTTFDAVFLDES
HLVTEHSLAFESVCHAFPQVCKFYVSATPRDGKDLPSAKRRFEIKTVTSECNSVDTFITS
QTEENSLYVLNHNTVLVFLAGKRECVNAAAKWNKNNLGDMMAYPLSSDNFHTMYSKLIQE
MDNNRVIVFCTNILETGVTMNVDCVVDFGWTMRPELDLVTKTLSLRRKRVTKNERAQRVG
RAGRLKEGYAIVCGKTDASINAVPPETLYGAALLSFVHGVQFYMNEFFEREWIEGITKAQ
ARVMTQFKLSPFLMRDIVRSDGSIPRAILPCIQNYAHRTCDLKSTKTSVLPMVYNSWPSY
TRLLAEVSRGEEKPPSALRRARVPFIISTMTDFDWEKLAHACLYFEPRVISVFSQSDETK
RVLNLQLSESGIMSSIEYVKATMNEYKRSISNLQRVIETFEVQTFITKLTRLDPTKRIRE
RISLYTDNVQTLQQALSKLETLSYSNNCEVSMDKASLDQLTEMVELQCRGVLNRNHVARI
FKLSSPPSQLLNLLVEKSKAFIATILMMIAAVSVWLVFKMRSENKKEATHEGENQASDLD
HWILEGKGKTYHDRYKRMGFSTEEEVGIYQEFHEATKRNKLTKHSQPERRKSKLRTEKPA
FMHFYDLKTDSNVLQAVFKTFSGVIFHVTKNPTADAAKLHEKLEQHLESDVNASSAWGDD
ETGAITCELTMKDGRKFLINMDRHNPMKPTEMGDEQGFKEFDGHFRQVGSTKLLGQAETS
VTHLEAASVKPMTKFSLDTRLMVGIVETPQIKQNVVLYGDWIVSPAHIQVGSGQITFKFI
HTTYCTTTDVLNKNGVVRFKGHDLILIRRPNGIPPVRKEIDAAVLTKPTEIQMLFRSLVD
LKHKVTVSDMCFQFGRSRWAHTISTDFGMCGGMVFDAASNKFLGVHTSSNPINKRNEFQP
FTQEMLDVMNSSGRKVEPGTWEFKKGDCGYEGQPLAILQGKAEDELQQLNDNAAGFGFNL
DAQIVRPPTLRSQEIFAREFGLDTTFKLVGQVTKGLIDKHVITGENPYFHKFLEEYPQFK
WVQSEMYEYAPSVLAYDAYFKDLRKYDRPHHPKIYDATVLEASKEQLIKMLKLAGLTKTN
VRTAEEVLMDTQWSTSAGPLYHGKKLDVVEHLDDEELIKFAETCRQALLDGRLNGIWNGS
LKAELRAIEKVEERKTRVFTAAPITSLLAMKFYVDDFNKQFYGTHLKAPHTVGINKFSRG
WEKLYNKLNQPGWMHGSGDGSRFDSSIDPFLFDVVLDIRKRFMHEKHHAALHIIYGEIMN
TKICLANGLIIQKHCGNNSGQPSTVVDNTLALMTAFLYAYARLTGDVKFEELDKNFIFVC
NGDDNKFAISPEFYWKYGCDFSPFLSELGLKYEFDEITDDICLNPYMSLTMTPTKLGIGF
SLAPQRIVAIVQWSRAGGVLHAYLAAIAACIESFNTQRLYLAMRAYALYLMDRHKHEIAA
LAELKGMDAMKLHIMGHAIMHYVEIPDYYQYGDMTTANIVILDDEVPDSENSMTFLQAGP
GDGNNLTETENPPKTSDGAIIPKTQATWSLPVIKPKAIGFSTKIPIDLIAQVPEGYVETL
SIKATTNQHQKWVQDVRSDLGITDDETWHKVVAAACIFFGDNGTSEDMDEDQVIEVKSGL
NSTQELPAKPFIRHARRNATLRKIMRHYSFETKLLFMKMRRIPHWAVKHGCVDEIVFDFM
IPDAFTSRQAVEKLKQTKISAIGVGTSNSMLTSETTNLKKTETRRRNDYDGHEGLIH
NT seq
6834 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccacctcgtgttgatgacttcattcctgaagttttctacaagaagcaggtg
gataaactgaaagagctgcttaaggcatggagttctcaaactacggtttaccataagctg
gcaggggatcgcgaactattggcgtttcttatgcttagccgggcactcctgaataagctc
agcgcttatcttgaagcagaggacaaaaggtgcatggtaatggctctcaacgctgacacc
gttgagacacttgctgttgttcgacaggccctaattggcatcaaaataaattttggaagc
tggcccctcgaacaaggatggatgatgatgatgaaacagctggatagctgtcttgatgaa
agctacaccgaaaacgcgcaaagccttaagaaggctatgcaagttgttggaatgaaactg
cttgcagcaaaaaatcgtatagaaatttgcgaaagatcagtggacaactatggcttaaat
accacgtgttacgacaggttacgcgatattggatcacgagtcagagacaccatcttacga
aagccatccagcaacatctttcctgaagagattcgtatgagttacttccgggcactaacg
acaacattacacctagcgactcagcagttctttctgaaagcgttagcgtacttatgtgga
atatatcaaccactccagtggctatttaatttctgtgtcggtacgtatgcaatgtgcaac
atgtttaacatatcctggcttgtcgttaaatggtccctgcggacacactttggtaagcac
tggaccatttatgcagcgagcttcctggtttgtgtgacgacaacttgcttttgggtatta
aaccagcgtgagaagacttatctccaatcagctcaaaagcagcgtaaattcatcggaatt
ttagcattttgcataactgtggtgtatatgtttgatgtcgacatggcggatgctttggcg
gccaacctcggaaaaatcactcggcttgttggtatgtacactgacgactataacggattt
gccaacaacgcaacaacttggttgcaaagtggcatcaattcaaatcagctatctggcgtc
cagaacacacttgctgtcgttctcaatcttgatgatgaggacactgatggtgatggaacc
gttattgaaagcgaagatcagttaactttcaaggcgtgggcgtccaccaaccacctagct
ggaaaacaattagttcgaccactgcaatatgacgttcaagcacgttacgcgctgaattct
gacaatgttgaagaactttcacgacaaatgtgttcggagaggaaacaatggtcccaagtt
gttgggtacactggatcaggaaaatcgactgtgctcccagtggcgtactacaatgatttg
aaatccaaaattggcaggcagcattgcatcttggtttgcgaaccaactcaagcagcaact
gttaatgttgttggtggaatctcgcacaaccttggaacgctggtttttgggcggcacgag
aagtgggaaaaccttggtgacaagtgcatccaagtcatgacttacggctcagcactagcc
tcgcaagctcgcgattcatctttcctaacaacttttgatgcagtatttctggatgagtca
cacctcgtaactgaacactccttggcgtttgaaagcgtttgccatgcattcccacaggtc
tgcaagttctacgtctcagcaacaccacgtgatggaaaagacttaccttcagcaaaaaga
aggttcgaaatcaaaacggttacctctgaatgcaattccgtggatactttcatcacgagc
cagactgaagaaaactcactatatgttttaaaccacaacacggttcttgtgttcttggcg
ggaaaacgtgagtgtgtcaatgcagcagccaagtggaacaaaaataatcttggggatatg
atggcgtacccattgtcaagtgacaacttccatacgatgtactcgaagctaatccaagag
atggacaacaatagagtcattgtattttgcacaaacatcctggagacgggtgtcaccatg
aacgttgactgcgttgttgactttggatggaccatgcgaccagagctcgatctcgtaaca
aaaaccctttcgctacggcgtaaaagggttacaaagaacgaacgagcgcagagagtggga
agagctggtcgccttaaggaaggctatgctattgtctgcgggaaaactgatgcatccatt
aatgctgttccgccagaaacactgtacggggcagctttactcagtttcgtgcatggtgtt
caattctacatgaacgaattctttgaacgagagtggatagagggaataacgaaagcgcaa
gcacgagttatgactcaattcaaattgtcaccgttcctgatgcgcgatattgttcggagt
gacggatctataccaagggcaattctcccatgtattcaaaattacgcccaccgaacttgt
gatcttaaaagcacaaagacatccgttctacccatggtctataactcatggccgtcatac
acaaggcttttagcggaagtgtctcgtggtgaagaaaaaccaccaagtgctttgcggcgt
gctcgtgttccattcataataagcacaatgacggacttcgattgggaaaagctcgcgcat
gcttgcctctattttgagccaagagtaatctcggtgttcagccagagtgacgaaacaaaa
agagtgttgaacctccaactgagtgagtctggaataatgagctccattgaatacgtaaaa
gctactatgaacgaatataagcggtcaatctccaatctacagcgagtaatcgaaacgttt
gaagttcaaactttcattacaaagctaacaaggcttgacccgacgaaaagaatccgcgag
cggatttctttgtatacagacaatgttcagacacttcaacaagctctatcaaagctggaa
acactttcatactctaataactgtgaagttagtatggataaggcatcacttgatcagctt
acagaaatggttgaacttcaatgtcgtggggttttaaaccgaaaccacgtcgctcgaatc
ttcaaattgtcaagccctccatctcaactgttaaacttacttgtcgagaagagtaaagct
ttcattgcaacgatcctcatgatgattgcagccgtttccgtatggctggttttcaaaatg
cgctctgagaataagaaggaggcaactcatgagggtgagaaccaagcatccgatctcgat
cattggatattggaaggaaaagggaaaacataccacgatagatacaagcgaatgggcttc
tcaactgaagaggaagttggcatttaccaagaatttcacgaggccacaaagcgaaacaag
cttacaaagcattcccaacccgaaaggcggaaaagcaagttacgcacagagaagccagcg
ttcatgcacttctacgacctcaagactgacagcaacgtgctacaggcggtgttcaagacc
ttcagtggagttattttccacgtcaccaagaatccaacagctgatgcagcgaagttgcac
gagaagcttgaacaacacctggaatcggacgttaacgcttcatcagcgtggggcgacgat
gagacgggggccataacatgcgagttaacaatgaaagatggcaggaagttccttatcaac
atggatcgacacaacccaatgaaacccacggagatgggggacgagcaaggattcaaggag
tttgatggacattttaggcaagttggatcaaccaagttgctcggccaagcggaaacatca
gtaacacatctggaagccgcctctgtgaaacccatgaccaagttctcattggacacgaga
ctcatggttggaattgttgaaacaccacaaatcaaacaaaacgttgttctatacggagat
tggatagtatcacctgcccatatacaagtgggtagcggccagatcactttcaaattcatt
cacacaacgtattgcacaaccacagacgttctcaacaaaaatggggttgtcagattcaaa
ggtcacgacttaatactcattcgaagaccaaatggcatcccaccagttcggaaggaaatc
gatgccgcagtcttaaccaaacccacggagatacaaatgctctttcgatccttggtcgat
ttgaagcacaaggtcacagtttcggacatgtgttttcagtttggtcgctcgcgctgggca
cacactatctcgacggactttggaatgtgcggaggtatggtttttgatgcagcgtcgaac
aaatttcttggcgttcacacctcttccaatcccatcaacaagagaaacgaattccagcca
ttcactcaggaaatgcttgatgttatgaattcctcaggaagaaaagttgagccaggtacc
tgggagttcaagaaaggggattgcggctatgaagggcaacccttagcaatactgcaagga
aaagcggaagacgagcttcagcagctcaatgataatgcagctggattcgggtttaactta
gacgcacaaatcgtccgaccgccaacgctgagaagccaagaaatctttgcccgagaattc
ggtcttgacacaaccttcaaacttgtcggtcaggttacaaaagggctcattgataagcac
gtaataacaggggagaacccatactttcacaagtttctcgaagaatatccccaattcaaa
tgggttcagagcgaaatgtacgaatatgcacctagtgttctcgcctatgatgcatatttt
aaggatttgcgcaagtatgacaggccacatcacccgaagatctacgacgccactgtactc
gaagcctcaaaggaacaattaattaaaatgctgaaactcgctggtcttacgaaaaccaat
gtcaggacggcagaggaggtcttaatggacacccaatggtcaacctcagctggtccgtta
taccatggaaagaagcttgatgttgttgaacaccttgatgatgaggaactcattaaattt
gccgagacatgtcgtcaagcactgctcgacggaaggttgaacggcatttggaatgggtcc
ctgaaggctgagttaagagctattgagaaagtggaggagagaaagacacgagtttttacc
gcagccccaattacaagcctcttggccatgaagttctacgttgacgattttaacaagcaa
ttttatggaacacacctcaaagcaccacacactgttgggataaacaaattttcacgtggc
tgggagaagctgtacaataagttgaaccaacccggctggatgcatggtagtggtgatggc
tctcgtttcgacagttcaatagacccattccttttcgatgtagttcttgacatacgaaaa
aggttcatgcatgagaagcatcatgccgcgctccacattatatacggtgaaatcatgaac
acgaaaatctgcttagccaacgggcttattatacagaagcactgcggcaataacagtggg
cagccaagcaccgttgttgataacacactggcactcatgaccgctttcctgtacgcatac
gcacggctaactggtgatgttaaatttgaagagctggacaaaaacttcatctttgtgtgt
aacggcgatgacaacaagtttgctatctcgccagagttttactggaagtatggatgtgat
ttctcaccattcctaagtgaacttggacttaaatatgaatttgatgagatcacggatgat
atttgccttaatccatacatgtctctcactatgactccaaccaagcttggtatcggtttc
agcctggcgccgcaacgaatagtcgcaattgttcaatggagtcgagctggaggtgtttta
cacgcttatcttgcggcgattgcagcctgcattgagtctttcaacacacaacgactttat
cttgccatgagagcgtatgcactttatctcatggatagacataaacacgagatagcagct
ctggcagagctcaaggggatggatgcgatgaaactacacatcatgggacatgccattatg
cactatgtcgagattccagactactatcaatatggagatatgacaacagccaacatcgtt
atccttgatgatgaggtaccggactctgaaaactccatgaccttccttcaggccggccct
ggagatggtaataacctaactgagacagagaatccgccaaagactagcgatggggctatc
atacccaaaacacaagcaacttggagtctcccggtgatcaaaccaaaagctattgggttt
tccacgaaaatcccaatcgatcttattgcacaggtgcctgagggttatgttgaaacactc
tccatcaaggcgaccacaaaccagcaccaaaagtgggttcaggatgtcaggtcagatctt
ggcatcacagatgatgaaacttggcacaaggttgtcgcagctgcatgtatcttctttgga
gacaatggaacatcagaggacatggatgaagaccaggtcattgaggtgaagagtgggttg
aactccacccaagagcttccagcaaaaccattcattcgacatgctcgtaggaatgccaca
ctaaggaaaataatgaggcactactcttttgaaacaaaactgttgttcatgaagatgaga
cgcatccctcattgggctgttaagcatggatgtgttgacgaaattgtgttcgatttcatg
attcctgacgccttcacgtcaaggcaggctgttgagaaattgaaacaaaccaaaatcagc
gcaattggagttgggacgtcaaactcaatgctcacatctgagaccaccaacctgaagaaa
actgaaacacgtagaaggaacgattatgatgggcacgaaggcctcatccactaa
DBGET
integrated database retrieval system
