Viruses: 37620039
Help
Entry
37620039 CDS
T40000
Symbol
gag, D1U25_gp1
Name
(RefSeq) Japanese macaque simian foamy virus; gag protein
Virus
2170198
Japanese macaque simian foamy virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Gag_FV_central
Gag_spuma_N
Gag_spuma_C
Motif
Other DBs
NCBI-GeneID:
37620039
NCBI-ProteinID:
YP_009508555
RS:
NC_039026
LinkDB
All DBs
Position
NC_039026:1743..3677
Genome browser
AA seq
644 aa
AA seq
DB search
MAAIEGDLDVQALTDLFNNLGINRDPRHREVIALRMTGGWWGPATRYNLVTILLQDDQGQ
PLQQPRWRAEGRAANPAVMFTLEAPWQDLRMAFDNIDLADDTLRFGPLANGNYIPGDEYS
LEFIPPAMQEIAQMQRDELENVLDIVGQITMQMSDLIGMQDAQIRGLEGQLRGLRGNLPV
AGTPPPPPPSLDIQPAAASSPYVVPASSAPAAPAAPADLGWFAGGPGPGSVDPRLARVAY
NPFLPGPSDGSGVAPVQPSAPPVASPLLPLPPAQPVQPIIQYVHPPPINPAQQVIPIQHI
RAVTGNAPTNPREIPMWIGRNASAIEGVFPMTTPDLRCRVINALLGGNLGLNLEPQHCIT
WASAIATLYVRTHGSYPIHQLAEVLRGVANSEGVAAAYQLGMMLTNRDYNLIWGIIRPLL
PGQAVVTAMQHRLDQEVSDAARIASFINHLNGVYELLGLNARGQSLRIPASGGQTTAGTS
AGRGARGRRSQQGAPGRQSSGQSQQQGRRSTQGQSRQSDNSDQNVQRQSQGGNGRGGYNL
RPRTYQPQRYGGGRGRRWNDQPARSDNQQRSQSQQPQSEARGEQSRTSGAGRGQGGRGNQ
NRNQRLAGGNADRTVNTVTTASASTSASGQDGSSPAPPASGSGN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcagctattgaaggtgatttagatgtccaagcattaactgatttgttcaataatcta
gggatcaatagagaccctagacatagagaggtaattgccctccgaatgaccggaggatgg
tggggaccagctactagatataatctggtgactatattattacaagatgaccaaggacaa
cctcttcagcaacctagatggagagctgaaggtagagctgctaatccagcagttatgttt
actctagaagctccttggcaagatctccggatggcttttgataatattgatttggctgac
gatactttaagatttggacctttagctaatggtaattacataccgggggatgaatattct
ttagaattcattccccctgctatgcaagaaatagcacaaatgcagagggatgaacttgag
aatgtattagatattgttggacagataacaatgcaaatgagcgacttaataggtatgcaa
gatgctcaaattagaggattggaaggtcaattaagaggactaagaggcaatctaccagtt
gcaggaactccacctccaccacctcctagtttagatatacaacccgctgctgcatcttca
ccttatgtcgtaccagcatcttcagctcctgctgctcctgcagcacctgctgatttagga
tggtttgccggaggacccggtcctggatcagtggatccaagactggccagagtagcttat
aatccatttttgcctggtccaagtgatggttctggggtagccccggttcagcctagtgct
cctcctgtggcttcacctttactaccactaccaccagcccaaccagtgcagccaattatt
caatatgtgcatccacctccaattaatccggcacagcaagttatacccattcagcacata
agagcggtaaccggaaatgctccaactaatccacgagaaataccaatgtggataggaaga
aatgcttcagctatagaaggagtgtttcctatgacaactcctgatttgagatgcagagta
attaatgctctgcttggaggaaatcttggacttaacttagaacctcaacattgcattact
tgggcttcagctatagcaacactttatgtaaggacacatggttcttaccctattcatcaa
ttagctgaagtccttagaggagtagctaattctgaaggagtagctgctgcctatcagctt
ggcatgatgttaactaatcgagattataatttaatttggggaataattagacccctgttg
cctggacaagccgtagttactgccatgcaacatcgcctcgatcaagaagtcagtgatgct
gctagaatagcttcttttattaatcatctgaatggtgtatatgaactcctaggcttgaac
gccaggggacaaagtcttagaatacctgcttctgggggacaaactacggctgggacctct
gccggaagaggtgctcggggccgtagaagtcagcaaggagcccctggaagacaatcttca
ggacaatcacaacaacaaggaagaagaagtacccaaggacagtctaggcagtctgataat
agcgatcaaaatgtgcaaagacaatcccaaggaggaaatggtagaggaggatacaatcta
agaccacgtacataccaaccgcaaagatacggaggcggacgaggtcgccgatggaacgat
caacctgcaagatcagataaccaacagcgttcccagtctcagcaaccgcaatcagaggct
cgtggcgagcagtcacgaacatctggtgcggggcgtggacaaggaggaagagggaaccaa
aaccgaaaccagcgattagctggtggaaacgcagatagaactgtgaatacagtgacaact
gcatccgcctcgacttctgcctcaggtcaagatggatcctctccagctcctccagcctct
ggaagcggaaattaa
DBGET
integrated database retrieval system