Viruses: 55060209
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Entry
55060209 CDS
T40000
Symbol
ORF1a, HO260_gp01
Name
(RefSeq) Zambian malbrouck virus 1; 1a replicase protein
Virus
2682610
Zambian malbrouck virus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Peptidase_S32
Peptidase_C32
Arteri_nsp7a
Peptidase_C33
Motif
Other DBs
NCBI-GeneID:
55060209
NCBI-ProteinID:
YP_009824945
RS:
NC_048209
LinkDB
All DBs
Position
NC_048209:248..6475
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AA seq
2075 aa
AA seq
DB search
MICTCDRNTYVVRRSGTYICIGCSRPRMYKTPKPDDFHFFGHITGYMARPNAALYADMGE
NTCRLEMVTMICNASRCWNDLPQVIEILKTACHIQGNDYAPLMRHMPAQFKFVRVCGPEP
TAYGFVSPTHCSVDYFPGATLALVPQYQYRGMERTYLPTKFDFGACMYNYGNYTVYLTVD
HVEWLRGCLATEPAPADKVDLCKAAIETLPEHFPAPIGWLNPTPTGRSMTASEAGHLKFV
HGLCWTQLFSDPENEVKVAGCFGYLMPWGAQGAYISRRLQVDGSKLVRDPQGKYVLYTLG
FGSWIGHIAEASWNPPERFVLKARFSVVPYNEPSSLPLYKLPKSLWIGGTASSKQYMPPP
PPGYKDWGRAGMCWVKLFHPDDRHAEARTAIMNCQVTAFGVTGSYLSYRLIKARLTAEID
PYGDWFITHPVGDPFHRHIQECEPEDDDTVVIGRISIVPLGTRAFPAFDFGHGYYYGRRH
KRGGGKKGPTPPVSYGAPPVTESPSPIPTGTEFSFVNETSDVVKAKAPPKPKPRTKPALK
LKLTPSEPSQAATPAEGSTSENERPEAAVVEMAAPRVSPYGALVKKCTGDQQTCVSLGKL
VQIKQLPDVPADGSCGIHIFEQIMAHMRGRPPNYLKFDRRYDDWATTLDVADLATAARLP
VGGSNCVHMRYRVTLFDNHFRVEVNEDGSTGFSRQCSSFACDPSVPVDILNCDSVDITGW
YEHHNGASSASDAMKLACQLCNYLLEEPGAPPPRRATVLKFVGAALKSEPAQLFGQKKKP
TPKLVATPASVVTSEAPASDPPATSAQSASSNADTTPLLSAQEQPAADDPAPSPKLVQEI
EGTVARPKSRFRPPDWQALRRYITTTCAHYCHVGRAPDFSRFLPYLLSLWNSSRKTLTGV
DLAAAAFLLLIGLLLAVLPTVVFIVPALILAIRARPHWVSYAGPLGMGVAYVGSVLLGPP
PNACIVDDGRCDTALRALSTRFSAGHGHSYTLGPVSFVHVLFKYFVHLEADLHLLSSVLC
MLDLLLCVLWLFRRRYCWRCFAPCIRTAPAEIPLRAVPLTRVSSTTLLDICDNFSRPPVD
IIKMATGYKGCYCGQLPCMTEGIKPVSYSKLDTKKVSPRTVIPVPTTPNEAVKAIAVLNA
RGVMARSAHTVERVDKLPCKNPFFPYDLNLKRIVVVDAETMDLFSDLGVDVSHLVVGDGD
FFKVMGVARPPANVAIKGGANLDFVLIFAWVVVWCLAGNYLQVPTPCGFGTPNPFCRGTF
VYPTTHTHGVCRYGFCMSNAGVSAQGLLDLPRFGIGGFFVGVLIAGILGITWAPLDALVM
STLLVLPSGSLFTALRVVIIVLAAKFMNFRHICLGLALVAPFDPYAAVTGLIILGCCVLS
ARYTGFGGLVTPYDIHAYTTNPRQAIALANAREGTYLASVRQAALTGKPAWFVPSNFGIM
VEGALRTGKPHFATCGVTGSSTGTGAIFDHKGKQVAVTATHVLSEDKTAFVNHSGLTKCI
SFKTKGDFAIGEVVPPFPGDFPPYVPTEAYEGRAYWLCAGGIDVGYLSKQGAVVFTGPGD
SGSAIITASGQVLGVHTGSDSNGCGAYTTPSGTTTVGSLKLSVIAKHYEGDLVPVETVPK
NVQADVTMIPRPLANIFKNSLHLQGGLNTIQLFISAVVLWQIFTTARNIPFIVAFFLLNE
LLPKCLVRGIYNYVLFALACFTPLAPKILYIRLLTAALNRNFSAMILHILIAAVTVAADT
LLINDFAQALDVTSFYIVPHTTDPMVTLVCGAGIILLSIVLEVSGYPGLGNLLSCNGSFD
PAFFMRYVNEGLRDGVGAKIGVEGLTAALAKNFSADELAFLDACAPAKCFTCAANLATTI
NQFIQSAEVKNLRAALSSVSTLSAGQQALARLDAFITGRPVDLCPGDVVVHLGLVGSDIF
ETYVGDKCFLAAPVQTALVAGTKCTLCKIIGQPESSVTTNGKYLMQNGKLLADAPVAKLE
CDGTKTQSEKRDRETRLAESQVVDVVKVGGKQYKKMWDTVTGDTFYVEEGDIKVDKSDAI
KALCLDCSLSEKDIKKLRALITRLQDMTKDEALNC
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgatttgcacatgtgatcgtaacacctacgttgtgagaagatctggaacttacatctgt
atcgggtgctctcgcccccgcatgtacaagacccccaagcctgatgattttcacttcttc
gggcacatcactggctacatggcccgccccaacgcggccttgtatgctgatatgggagaa
aacacttgccgccttgagatggttactatgatctgcaacgcctcccgttgctggaatgat
ctcccacaggtcattgagatcctcaagactgcttgccacatccagggcaatgattatgct
cccctaatgcgtcacatgcctgcacagttcaagttcgtccgtgtgtgcggtcctgaacct
actgcctacggatttgtgagcccaactcactgcagcgtggactacttcccaggagcaact
cttgccttggttccgcagtaccaataccgcggcatggagaggacttatctccctactaaa
tttgattttggggcttgtatgtacaactatggaaactacacggtctacctcacggttgac
catgttgagtggcttcgcggatgcctagccaccgagcctgctccggcagacaaagttgac
ctttgcaaagctgccattgagactcttcctgaacacttcccggctcccatcggatggctg
aacccaacacctacaggtcgatccatgactgcatcagaagcaggacacctgaagtttgtt
cacggcctctgctggacgcagctgtttagtgacccagagaatgaggttaaagtggccggc
tgctttggctacttgatgccctggggtgcgcaaggtgcctacatctcacgtcgccttcaa
gtggacggcagcaagctcgtccgcgaccctcaagggaagtatgttctttacaccctaggg
tttggatcttggattggccatattgctgaagcatcctggaacccgcctgagagattcgtc
ctcaaggcgcgctttagcgttgttccctacaatgagccatcctcgcttcccctttacaaa
cttcccaaaagtctttggattggcgggaccgccagttcaaagcaatacatgccacccccc
cctcccggctacaaggattgggggcgcgctggcatgtgctgggtcaaattgttccacccc
gatgatcgccacgctgaggctcgcactgcgatcatgaattgccaggtgaccgcttttggc
gtaactggcagttatctcagctatcgccttataaaagctaggctgactgctgaaattgac
ccatatggcgattggtttattacccaccccgttggagaccctttccatcgccatattcaa
gagtgtgagcctgaagacgatgacactgtggttatcggccgcatttccatcgtccccttg
ggtacgcgtgcttttccagccttcgatttcggtcacggatattattacggtcgtcgccac
aaaagaggcggcggtaagaaggggcccacccctcccgtaagttatggggccccccctgta
actgagagccctagcccaatcccaacgggcactgagttctcctttgtcaacgaaacgtcc
gacgttgtcaaggccaaagcaccacccaagcccaaaccccgcactaaacctgcactcaaa
ctcaaacttaccccatctgagccttcacaggctgcaactcccgcagaaggttctactagt
gagaacgaacgtcccgaagcagcggttgttgagatggcggctccacgagtgtctccttac
ggagctcttgtcaagaagtgcacaggtgaccagcaaacgtgcgtgagtctgggcaaactt
gtccaaatcaaacaacttccggatgtccccgcagacggatcttgtggcatccacatcttt
gagcagatcatggcccatatgcgcggacggccccccaactacctcaagttcgaccgtcgc
tatgatgactgggccaccactcttgatgttgctgatcttgctactgcagctcgcctcccc
gtcggcggctctaattgcgtgcacatgcgctacagggtaaccctctttgacaatcacttt
cgggtggaagtcaacgaagatgggtctacagggttttcccgtcagtgcagttctttcgca
tgtgacccatcggtccccgttgatatcctcaactgtgattctgttgacatcacaggttgg
tatgaacatcacaacggggctagcagtgcaagtgacgccatgaagctggcttgccagctg
tgcaactatctgcttgaagagccaggcgcccctccaccacggcgcgcaacagtgctgaag
tttgttggagctgctctcaaatctgaacctgcgcagctttttggacaaaagaaaaagcca
acacctaaacttgtagccacacctgcaagcgtggtcacatcagaggcgcccgcctctgac
cctccagctacctcagcccaatctgcttcctctaatgctgacactaccccattgttgagt
gctcaggagcaacctgcagcggatgatcccgcgcccagtcccaaactcgtgcaggagatc
gaagggacagtggctaggccaaagagcaggttcaggccacccgactggcaagctctgcgc
cgttacatcaccacaacgtgtgcgcattattgccatgtgggacgtgcgcctgatttctct
cggtttctgccctatctcctttccctttggaactccagccgaaagacgcttactggtgtg
gacctcgctgctgctgcttttcttctacttattgggctcttacttgctgttttgcctact
gtggtcttcattgtccccgcactcattctcgccatccgagctcgacctcattgggtctcc
tacgctggacctcttggcatgggtgttgcttatgttggtagtgttcttttgggcccacca
cccaacgcttgcattgttgacgatggacgttgtgataccgctctccgtgctctctccact
cgctttagtgctggacacggtcatagctacacgctggggccagtttcctttgtccacgtc
ctctttaagtactttgttcatttggaagcggatcttcatctactatcctctgttttgtgt
atgcttgatttgctgttgtgtgtgctgtggctctttcgtagacgttattgctggaggtgc
tttgctccctgtatccgcacagccccggctgagatcccactacgggctgttccactcact
cgtgtttcgtctactacgcttcttgatatttgtgacaacttctcccgcccgcccgtcgat
atcatcaagatggccacagggtataagggttgctattgcggacaactcccctgcatgact
gaaggcattaagcccgtctcctacagcaagttagacaccaagaaagtgtccccccggacc
gtaataccagtgcccactaccccaaatgaggccgttaaggccattgcagtccttaatgca
cgaggagtcatggcgcgttctgcacacacggtcgagcgagttgacaagctcccttgcaag
aacccattcttcccgtatgatctgaaccttaagaggattgttgtagtggacgctgagacc
atggatttgttttccgacctcggtgtcgatgtcagccacctggttgttggtgatggagac
ttcttcaaagtcatgggcgtggcgcgaccccccgccaatgttgccatcaagggcggtgcc
aatcttgattttgtcctcatctttgcttgggtcgttgtttggtgtcttgctggaaactac
cttcaggtgcccaccccttgcggttttggcactcccaatcctttctgtcgaggtactttt
gtctaccccacaacgcacacacatggtgtctgtcgctatggcttctgcatgtctaatgct
ggtgtatctgcccaaggcctgctcgacctgccccgctttggtattggtggtttctttgtc
ggtgtcctcattgccggtatccttggcatcacatgggcaccccttgatgctctggtcatg
tcaactctcctcgtgcttccaagtggttctcttttcactgccctccgtgttgtgatcatt
gttcttgctgccaaattcatgaacttccgccacatatgccttgggttggcacttgtggcc
ccctttgatccctatgccgctgtcactggtttgatcatcctagggtgctgtgttttgtct
gctagatacacaggttttggagggctcgtcaccccatatgacatccatgcttatacaacc
aaccctcgtcaggccattgcactcgcaaatgcccgagaggggacctaccttgcctctgta
cgacaggctgcgctcactggtaagcctgcatggtttgtgccatccaactttggcattatg
gtcgaaggtgccttgaggactggcaaaccccactttgccacctgcggcgtaaccggctct
agcacaggcactggagcgatctttgaccataaaggcaagcaggttgctgtcaccgcaacc
catgtcctctctgaagacaagaccgcatttgtcaaccacagcgggttgaccaagtgtata
agcttcaagaccaagggtgactttgctattggagaggtggtaccacccttcccaggtgac
tttccgccttatgtacccacagaggcctacgagggccgcgcgtactggttatgcgcgggt
gggattgatgtagggtacctctccaagcaaggagcagttgttttcaccggccccggtgat
tctggatcggccatcatcacggcttctggccaagttcttggggtccacacaggttcagac
tctaacggatgcggagcgtacacgacccccagcggtaccactaccgttggatcacttaag
ctgtctgtgatcgcaaagcattacgaaggagaccttgtccctgtggagacggtgccaaag
aacgtccaagcagacgttactatgatccctcgaccattggccaacattttcaagaacagc
ctccatctgcagggtggacttaacacgatccagcttttcatttcagctgttgttctctgg
cagattttcacaaccgcccgcaacatccctttcattgttgctttcttcttgctgaacgaa
ctgctccccaaatgtcttgtgcgtggtatctacaactatgtgctttttgcactagcctgc
ttcactccccttgcaccgaagatactatatatcaggcttctgactgctgccctcaatcgt
aatttctctgctatgatactacacattcttattgccgcagtcactgttgcagctgacact
ctcctgatcaatgattttgcacaagctttggatgtgacttccttttacattgtccctcat
accacagaccccatggttactcttgtctgtggtgctggtatcattcttctctccatcgta
ctggaagtctcaggttaccccggccttggtaacctgctgtcatgcaatggcagctttgac
cctgctttctttatgcgctatgtgaatgaaggccttcgtgacggtgtcggcgccaagatt
ggcgtcgagggacttactgctgctcttgctaagaacttttctgctgatgagctcgccttc
cttgatgcttgcgcccctgcaaagtgtttcacatgcgctgccaacctcgccaccaccatc
aatcaattcattcagtctgctgaggtcaagaacttgagagctgctctttcttcggtgtct
acgctgtcggctgggcaacaggcgttagcccgccttgacgcgttcatcacaggaagacca
gttgatttgtgccctggcgatgttgttgtgcatctagggcttgtcggctcagacatattc
gagacgtatgtcggcgacaagtgctttttagctgcccctgtccaaactgccctagttgct
ggcaccaaatgtaccctttgtaagatcattggacaacctgagtcatctgtcacgaccaac
ggcaagtacctcatgcagaacggcaagctgctcgcagacgcaccagttgcaaaacttgag
tgtgacggtaccaaaacccagtcagagaagcgcgatcgcgagacacgccttgctgaatct
caagtggtcgatgtcgttaaggtcggtggcaagcaatataagaaaatgtgggatactgtt
actggagacaccttctacgttgaggagggtgacatcaaagtggacaagtcagacgcaata
aaagctctttgcctcgactgttcactaagcgagaaagacatcaaaaagctccgtgctttg
atcactcgccttcaggatatgaccaaggatgaggctttaaactgctaa
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