Viruses: 80398269
Help
Entry
80398269 CDS
T40000
Symbol
SRR5466727_2_3, QIJ95_gp3
Name
(RefSeq) ssRNA phage SRR5466727_2; RNA-directed RNA polymerase
Virus
2786431
ssRNA phage SRR5466727_2
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
RNA_replicase_B
Motif
Other DBs
NCBI-GeneID:
80398269
NCBI-ProteinID:
YP_010769297
RS:
NC_073931
LinkDB
All DBs
Position
NC_073931:2120..4027
Genome browser
AA seq
635 aa
AA seq
DB search
MSHSLGEALPALQVASYDAKLTTDLTNELLSIHARKLLDRLSEEGFQAGGLYIADCITSG
DLLGLCNYDPDVLDLGATDQSILRQVLAYFSKRDDIDLGVDREAAARDKFLAAERACAVT
NGRFRDLAFGNGTVFHPFVHAVLHGAIRKIARLLGECPSLDTLRPRLGPGATTRTPKKNA
CATIKMASRPACSANFSDPVEGLSTLNVGPDDVNVIDLSIDDARLAFVPKNFKTKRAICT
EPSLNGMFQLGLGDYMSQRLLKVGIDLKDQSANQRAALYGSISGASATLDLSSASDTVSI
ELVRHLLPPDWFDLLMRLRSRSMRDKTPDGYRYYSLEKISSMGNGFTFPLETTIFWAIAR
EVVELVDPNSRIRVLVYGDDIIVPTTCALALAYTLSELGFSTNAKKSFWTGNFRESCGAD
YVFGSSVRPVFVTDRLAGGDFFRLHNFYLGRGDFESAAFWEKQIDPSIRHYGPEGFGDGH
LHRLDGGVLVAYPKRGYGGFQFKTWTFSPKKLEKKVADWLGKKRSSFVPKWNAKRRDFSD
REKITWVEFHPKHDFIVRRLATYVQYERETRSLALTESDRLRSIRSVNGESREPGHIYAD
RRMPDPVEPGDYDKFFVVPGEGKVRLTEVYIFSHQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattctttgggcgaagcattacctgctttgcaggttgcatcttacgatgcaaaa
ctcactacggatttgacaaatgaactattgtccatccatgcgcgtaaactgcttgatcgg
ctttcggaagaaggctttcaagcaggcgggctctacatcgctgattgtattactagcggt
gatcttcttggtctgtgtaactatgatcctgatgttctggatctcggtgccacggaccag
tccatcctgcgacaagtcctcgcttatttctcaaagcgagacgacatcgatctcggggtg
gaccgtgaagcagccgcgagggataaattcctcgcagctgaaagagcttgcgccgtaacc
aacggccgctttcgcgacctcgctttcggtaatggaacagtgttccatccgttcgtccac
gccgtgcttcacggcgcgattcggaaaattgcgaggctgctaggcgagtgtccatcactg
gacacactccgacccagactagggcccggggcgaccacgcgtacgccaaaaaagaatgcc
tgcgccaccataaagatggcaagtaggcctgcttgtagtgcgaacttcagtgatcctgtt
gagggcctttcaacccttaatgttggaccagacgatgttaacgttatcgatctttcgatc
gacgacgccagactcgcgttcgtacccaaaaatttcaagaccaagcgtgcgatttgcacg
gaaccgtccttaaacgggatgtttcaacttggtcttggcgattacatgtcccaacgtctt
ttgaaagttgggatcgacctgaaggaccagagcgctaaccagcgtgcggccctttatgga
tcgatttcgggtgcttcagcaacactcgacttgtcgtcggcgtctgacactgtatctatc
gagctggtacggcacttgctgccgccagattggtttgacctcctgatgcggctgcgaagc
cgtagtatgagggataagacccccgatgggtatcggtactactccttagagaaaataagc
tcgatggggaatggatttacgttccccctcgaaaccacgatcttctgggcaattgcccgg
gaagttgtggagctcgttgaccctaactcacggattcgcgtgcttgtgtacggggacgat
atcattgtccctacgacctgtgcgctcgccctcgcctacaccctttccgagcttggtttt
tcgaccaatgcaaagaagagtttctggacgggtaacttccgggagtcttgcggagcagac
tacgtttttggttcttcggttcgtcctgtttttgtcaccgaccggcttgccggcggcgat
ttcttcaggctgcacaacttctacctggggcgcggcgattttgaatccgcagcgttctgg
gagaagcagatcgacccatccatacgtcactatggccctgagggctttggtgatgggcac
ctccaccgtcttgatggtggggtgctcgtagcttacccaaaaaggggctacggaggattc
cagtttaaaacctggactttctctcctaaaaagttggagaagaaggtggccgattggtta
ggcaaaaagcgaagttccttcgttcctaagtggaacgcaaaaagaagggatttttctgac
cgcgaaaagatcacttgggttgagtttcacccgaagcatgactttatcgttaggcgcctt
gccacatatgtccagtacgaaagggagacccggtcgttagctctcactgagagcgaccgt
ctgaggtctatccgttccgttaacggcgagagccgtgaacctggacacatatatgctgac
cgtaggatgccggaccctgttgaaccaggggattatgacaagttttttgtcgtccctggt
gaaggcaaggttcgtttaaccgaagtttacatctttagtcaccagtaa
DBGET
integrated database retrieval system
