Viruses: 80532036
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Entry
80532036 CDS
T40000
Symbol
UL6, QKE66_gp50
Name
(RefSeq) Cervid alphaherpesvirus 1; capsid portal protein
KO
K26020
Herpesviridae portal protein
Virus
79891
Cervid alphaherpesvirus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Herpes_UL6
CoV_nucleocap
TP2
SDP_N
Motif
Other DBs
NCBI-GeneID:
80532036
NCBI-ProteinID:
YP_010795020
RS:
NC_075564
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All DBs
Position
NC_075564:complement(92258..94405)
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AA seq
715 aa
AA seq
DB search
MAECERVVTERVLNLAGPARDRGAPGLPAGWVRIHPTPRTRLFKEILLGELGYTEGQGVY
SAVRCTETVVRQVQATILGATLNAARYEDVARDWRAYTRARGLRAADIAARYGAAGEAEA
VRIAEHVFETWRRTLQMSLVECVRGVAAAFPAGGAGSPACFARYVDWLVCLGLVPLRRAA
APPAPRADAPRAAAAAGGELARRLDVAGRVLAECEAFAAELLRCAGAVTILDYDRTEILY
NFREKRFAVRDAVTGEEGECFVLWAPVWRGGDVLFESPMQRLHGEVLACHALREHARLCQ
LLNTVPLRVLVGRRAEGAAGEGAPGAPSVEKLLGEGEDAAASSSAARLIKLIVNMKGMRH
IGDISETVRSYLDDTAAGLFDVSDVDTSQPGFGAAGGRRAAAGGQQIQDAFRASVVHSIN
GMLEGYVSNLFKTIESLKGANRDLAERLRASERELQAARERALLAAQRAADAARGGPGPA
GGLGPPSAGSADGGLGHEVIDISGLMGPDSYIANSFQSRYVPAYADDVERLSRLWEQELL
RCFKLARTANNQGQEVSVVYSNSSISLILAPYFFSVLRVRRFGFLIAHQEACRSEEELCG
AVFKKTRLETYLAELAAIFTADARRALQLAPEPRGARERSGSRSRSRSRSRSRSRSRSRS
RARRREREEERRRGRRWDGRDARRPRAGPAPRELDAGEPAAGRARGPGGAAAGAR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtgcgagcgcgtcgtgaccgagcgcgtcttaaacctggccggcccggcacgt
gaccgcggcgcgccgggcctgccggccgggtgggtgcggatccacccgacgccgcgcacg
cggctcttcaaggagatcctgctgggggagctgggctacaccgagggccagggcgtctac
agcgccgtgcgctgcacggagaccgtggtccggcaggtgcaggccaccatcctgggcgcg
acgctgaacgccgcgcgctacgaggacgtggcgcgggactggcgcgcctacacgcgcgcg
cgcggcctgcgcgccgccgacatcgcggcgcggtatggcgccgcgggcgaggcggaggcg
gtgcggatcgcggagcacgtgttcgagacctggcgccgcacgctgcagatgtcgctcgtc
gagtgcgtccggggcgtcgcggccgccttcccggcggggggcgccggcagcccggcctgc
ttcgcccggtacgtggactggctcgtgtgcctggggctggtgccgctgcggcgcgccgcc
gcgccgcccgcgccgcgcgccgacgcgccgcgggccgccgccgcggcgggcggcgagctg
gcccgccgcctggacgtcgccgggcgggtgctggcggagtgcgaggccttcgcggcggag
ctcctgcgctgcgccggggccgtgaccatcctcgactacgaccgcaccgagatcctctac
aacttccgcgagaagcgcttcgccgtgcgcgacgccgtcaccggcgaggagggcgagtgc
ttcgtgctgtgggcgcccgtgtggcgcggcggcgacgtcctcttcgagtcgcccatgcag
cggctccacggcgaggtcctggcctgccacgcgctgcgcgagcacgcgcggctctgccag
ctgctcaacaccgtgcccctgcgggtgctcgtgggccggcgcgcggagggcgccgcgggg
gagggcgcgcccggcgcgccctccgtggagaagctgctcggtgagggcgaggacgcggcc
gcgtcctcctcggcggcgcggctgatcaagctcatcgtcaacatgaagggcatgcggcat
atcggcgacatctcggagaccgtgcgctcgtacctggacgacacggccgccgggctcttc
gacgtctcggacgtggacacctcgcagccgggcttcggcgcggcgggcggccgccgcgcg
gccgcgggcgggcagcagatccaggacgccttccgggcgtccgtggtgcacagcatcaac
gggatgctggagggctacgtcagcaacctcttcaagaccatcgagtcgctcaagggcgcc
aaccgcgaccttgccgagcggctccgcgccagcgagcgcgagctgcaggcggcccgggag
cgcgcgctgctggccgcccagcgcgcggccgatgccgcccgcggcgggcccgggcccgcc
ggcgggctggggcccccgtccgcgggctccgcggacggggggctggggcacgaggtcatc
gacatctccgggctcatgggcccggactcctacatcgccaacagcttccagtcgcggtac
gtccccgcgtacgccgacgacgtggagcggctctcgcggctgtgggagcaggagctgctc
cgctgcttcaagctggcccgcacggccaacaaccagggccaggaggtgtcggtcgtgtat
tcgaacagctccatctccctgatcctggcgccgtacttcttctccgtgctgcgggtccgg
cgcttcggcttcctgatcgcgcaccaggaggcgtgcaggtcggaggaggagctctgcggg
gcggtctttaaaaaaacgcgcctggagacgtacctcgcggagctcgcggcgatcttcacg
gccgacgcgcgcagagcgctgcagctggcgcccgagccgcgcggggcccgggagcggagc
ggcagccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgcagc
cgcgcgcgccgccgcgagcgcgaggaggagcgccgccgcgggcgccgctgggatggccga
gacgcgcgacggccccgcgccgggcccgcccctcgagagctcgacgctggagagcctgct
gcgggacgcgcgcgagggcccgggggggccgccgcaggtgctcgatga
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