Viruses: 80539005
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Entry
80539005 CDS
T40000
Symbol
QKS43_gp1
Name
(RefSeq) Rubus virus 1; replicase
KO
K26628
Betaflexiviridae RNA replication polyprotein
Virus
2754817
Rubus virus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
Vog
Vog cluster
Motif
Pfam:
Vmethyltransf
RdRP_2
Peptidase_C23
Viral_helicase1
2OG-FeII_Oxy_2
2OG-FeII_Oxy
AAA_22
ATPase_2
AAA_14
AAA_19
Motif
Other DBs
NCBI-GeneID:
80539005
NCBI-ProteinID:
YP_010800399
RS:
NC_076865
LinkDB
All DBs
Position
NC_076865:86..6523
Genome browser
AA seq
2145 aa
AA seq
DB search
MSFSYRSPVEEVLNKFTSDEQSRVASEAIIALTKAEKNSFENFSFAMGDLQRERLIQAGI
YISPYSCMPHSHPVCKTLENYFLFRVLPRLLSSDFYFVSIKKGKLDLLRKRDNSLNLCEF
INRCVTSVDRTRYGAELHAHKSQNIPGVYPRARNGFEGTPELRDLLPLALKQKRRHLFLH
DELHYWSQGSLFAFLTHVQPEVMLATVVIPPELLISSTRSLNPWCYTYEVSGNSIFFAPD
GILQQAYEQPIDCVFLLKTRRIILPCGDVYCLDIVESKFAHHLISITKGDACVGTVRGFS
GFDAVSASSIASLGRNVSDALPIHYSVISKLYRYLRTLKKPDVESAMAKLSQILPCPTGL
EIKFCEEFTKLVLQCSTVNTKILPDNFTLIKDWFARLLPRSFSRYFSCVRRVTLDTFIEN
LQPFNFLIKTIDLHESFPMEIVFISSGDFASEPDHVLSGLDEHWFGREQLTGLEDRVPAP
YCSLFKEERYDDAIETAKFLKNEVTEEQFVRVVFRKALRARFNIHVKEQDFIEMVSLATY
IMESSRVYKIFKPESLSCALLNLFSGLSTNLDCVKAGARWFYSFILYGPYWFLKRSSRRF
NMKFLGHVKPIESFGKLKNSKVIFSSDFQKIIWDQFDVALKELRSGKGSECKISESKTQG
VNLEQPIEIGEKSDEQSHSDVEKLCIVPIKTESANLSFGKEVVNGADGCTCECGAMVKTG
ITSFRPQFGLVEFGDDLGNRVGALFSKNGLGYVYNGGSHSSLGWRGFLDALVSSCGEDPN
YYNQCLVQRFRKGGKIGFHADNESIYEKGHRILTVNYCSEASLDFKHGSSVRNIKLYDSF
YYVMPEGFQDEHKHQISKVEEGRISFTFRRDSRAGEEVVKEPKVDMNYGRVFECKGKLPI
QSIHDIDEAIMKTSNFAKVYLCNCSGPQIRSELEKVQECLKLAIQVEGLMMFDTCAIFNE
LGTRRAKEVMSEHNGVLVCLYGGAMLKIEGRSGFVIGPEFRTIQSKHIELQSMEESSVMA
FCYKPRNDITTGIRVHDSGCDFDEFTEVLFDVSITLSPDHSVDDYRVFSVPADGNCFWHS
VGPVIGVDGRILKKACKSLLTDEMRANKALAYQMGDEVWAEREAIAAFCSIYSVELLVFF
MREGVPWRFTPKKVSKYAILKNESWHFEPCMPKNGCVIQAIAECLGRREADVVAVLGREE
HRVIYEELMAGNGLSAFTLEQCFEIYGINAFVEFSNEQVEMNAEGSKVGHFSLKDEHLKF
CKDPKSGSFSPIVHEVNQVKKHAIAILKSAGNLIKVTPSIERAARLADSMEAGTTGVMFS
STMNAKENLLADHSNLKKLERNVIAIIGTFGSGKSRLFKEFISKSLNKYIVFVSPRKALA
VSVANELGIGKGQKGKICMARVSTWEVFLGSIRSVKSGATIVIDEIQLYPPGYLDLVMLL
LSEGVNVVVAGDPCQSDYDSDSDRHIFAGVEPDIVRVLEGEKYRYNLLSHRFKNPMFKGR
LPCRFARGKVDVNEEEYNLWDSIAEFAAQRSKSVEVVLVAGFEEKHIVKVYMPTIECLTY
GESTGMTFKHGAVYISEAGRMCSEKRWITALSRFSYCIDFINGSCVDYNGLAQIYNTRAL
GNFLMKRASESFIFDMLPGEPVFTEGFGTQVGKDFGVKEEKLQGDPWLKTMIFLGQQSDQ
EIEEMQEAFKNEPWFRTHVPIFPVEAIRARWAHKIMDKYAREFRIGQEISNQFPEDHSKN
NGARMTTAADRYEAIYPRHRGTDSVTFLMAVRKRLTFSNPQKESAKFREVRNYGLVFLKE
FMKRVPLKRCWDPVKFSEALQDFEDKKTSKSAATIENHSGRSCRDWLSDIAVIFMKSQHC
TKFEKRFADAKAGQTLACFHHSVLCRFAPYMRYIEKKLFEALPKNLYIHSGKGLDELNEW
TKIFFNGDECTESDYEAFDASQDHYILAFEVAVMKFLNIPGDIVEDYIFIKTRLGSKLGN
FSIMRFTGEASTFLFNTMANMLFTFLKYDLNGSEGICFAGDDMCANRRLRERKGFEGLMK
KMKLKAKVCFTKNPTFCGWCMSPQGIYKKPQLVLERMMIARETNNLQNCMDNYAIEVSYA
YRLGEKIIGRLEEEEAEAHYNCVRFIVKNKHLLRSSVRNLFSCVL
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcatacagatcgccagttgaagaggtactcaacaagttcacttcagatgaa
caatcgagggttgcaagtgaagccataatcgctcttacgaaagctgagaagaactcattt
gaaaatttttcatttgcaatgggtgatcttcagagagagcggttaattcaggctgggatt
tacattagtccctactcttgcatgcctcattctcatcctgtttgtaaaactttagaaaat
tacttcctttttagagttctacctaggttgcttagttcagatttttactttgtttcaatt
aagaaaggtaagttagatcttttaagaaagcgtgataatagtttaaatttgtgtgaattt
attaataggtgtgtaactagtgttgatagaactaggtatggtgctgaattgcatgctcac
aagtcccaaaatattccaggtgtttacccaagagctagaaatggttttgagggtacgcct
gagctgcgtgacttactcccacttgctctaaagcaaaaacgcaggcatctttttctgcat
gatgaacttcattactggagtcagggctcactgtttgcctttttgactcatgtgcagcct
gaggttatgcttgcaactgttgttatcccacctgagcttctcatatcatcaaccaggtca
ctgaatccctggtgttacacttatgaagttagtgggaattcaattttctttgctcctgat
ggtattcttcagcaagcttatgagcaaccaattgattgcgtgttcctactcaagactaga
cgtattattttgccatgtggtgatgtatattgtctggatattgttgagtctaagtttgct
catcacctcatatcaatcactaagggtgatgcttgtgtgggcactgttcgcggcttttct
ggatttgatgcggtgtcagcttcatcaattgcaagccttggtagaaatgtttcagatgca
ttgcctattcattactccgtcatttcaaagctttataggtatttgcgtactctcaagaag
cctgatgttgagtctgcaatggccaagttgtcacagatcctcccatgtccaactggactt
gagattaaattctgtgaggagttcacaaagctagtcctgcagtgctccactgtgaataca
aagattctcccagacaatttcactctgataaaggattggtttgcaaggctcctcccaagg
tcattctcccgatatttctcttgtgttaggagggtaactttggataccttcattgaaaac
ctccagccatttaatttcttgattaaaaccattgatcttcatgaaagttttccaatggaa
attgttttcatttccagtggggattttgcatccgagcctgatcatgttttgtctggtctt
gatgaacattggtttggaagggagcaattaactggcttagaagaccgtgtacctgcgcca
tactgcagcttattcaaggaggagaggtatgatgatgccatcgagactgctaaatttctg
aagaatgaggtgactgaggaacagtttgtgcgggttgtttttaggaaggcacttcgagcc
cggtttaacattcatgtcaaagagcaagattttattgagatggtatcccttgcgacatat
atcatggaaagctcaagagtctacaaaatcttcaaacctgagtctttatcttgtgcactt
ctcaatctgttttcaggtctctcaaccaatcttgattgtgttaaggctggtgctagatgg
ttttacagcttcattctgtatggcccttattggttcttaaagagaagttcgagaaggttc
aacatgaagtttttgggtcatgtgaaacccattgaatcttttggtaagctcaagaattca
aaggtaatcttctcgagtgactttcagaaaattatttgggatcagtttgatgttgctctg
aaggagctcaggagtggaaagggtagtgagtgcaaaatttctgaatccaagacccagggt
gtcaacttagagcagcccattgagattggggagaagtctgatgaacagtcacattctgac
gttgaaaagttgtgcattgtgccaattaagactgagagtgcaaacttaagctttggcaaa
gaggttgtgaatggtgcagatggttgcacttgtgagtgtggtgctatggtcaaaactggg
atcacaagctttagacctcaatttggcttggttgaatttggagatgatcttggcaataga
gtgggagctctcttttcaaagaatggtctaggctatgtatataatgggggttcacactcc
tctcttggctggcgtggtttcttggatgcactagtttcatcctgtggtgaggatcctaac
tattacaaccagtgtttggttcagaggttcaggaaaggaggaaagattgggttccatgct
gataatgagagcatttacgagaagggtcacagaatactgactgtcaattactgcagtgag
gcttccctagatttcaagcatggcagttctgtcagaaatatcaagctttatgactcattt
tactatgtaatgcctgaaggtttccaagatgagcataagcatcagatttcaaaagtcgaa
gaggggcgaatttcattcaccttcagaagggactcaagagctggcgaagaagttgtgaag
gagcccaaagttgacatgaattacggacgagtttttgaatgcaagggcaaactgccaatt
cagtcaattcatgatattgatgaggcgatcatgaaaacttcaaactttgccaaggtttac
ctttgcaattgttccggccctcaaattaggagtgaattggagaaagttcaggaatgttta
aagctagcaattcaagttgaggggctcatgatgtttgacacatgcgccattttcaatgag
cttgggactagaagggcaaaggaggtaatgtctgaacacaatggagtgctggtgtgtctt
tatggaggtgccatgcttaagattgagggaagatcagggtttgttattggcccagagttc
aggactatccaaagtaagcacattgaacttcagtcgatggaagagtcttcagtcatggca
ttttgctacaagcctcggaatgatataaccactgggattagagttcatgactctgggtgt
gactttgatgaatttactgaggttttgtttgatgtgagtatcacactatcccctgaccat
tccgttgatgactatagagtgttttcagtaccagctgatggtaactgcttctggcattct
gttggtccagtcattggggtcgacgggaggattttgaagaaggcatgcaaatccctgctc
actgatgaaatgagagctaacaaagcgctagcttatcaaatgggtgatgaagtgtgggct
gagagggaagccattgcagctttttgctctatctactctgttgagcttttggttttcttc
atgagggaaggggtcccatggagatttactccaaagaaagtcagtaaatatgcaatcttg
aaaaatgaaagctggcatttcgaaccatgcatgccaaaaaatggctgtgtgatccaagct
attgcagagtgcttaggaagaagagaggctgatgttgttgctgtgcttgggagagaggag
cacagagttatttatgaggagctgatggctggaaatggcttaagtgctttcactcttgaa
caatgctttgaaatatatggcattaatgcatttgtggagttttcaaatgaacaagttgaa
atgaatgcagagggtagcaaagttgggcatttttcacttaaagatgaacacctcaaattt
tgcaaagacccaaagagtggctccttctcaccaattgttcatgaggttaaccaggtgaag
aagcatgcaattgcaatcctcaaaagtgctggcaatctgataaaagtaaccccatcaata
gagagagcagcaaggctagctgattctatggaagctggcacaactggtgtcatgttctca
agcactatgaatgcaaaggaaaatttgcttgctgatcattcaaatttgaagaagttggag
aggaatgtgattgcaattataggtacttttgggagtggtaagagcaggttgttcaaggag
ttcatttctaaatcactcaataagtacattgtgttcgtctcaccccgcaaggctctggct
gtatctgtcgctaatgagttgggaattggaaaagggcagaaaggaaagatttgcatggct
agagtaagcacgtgggaggtgttcttgggatcaattcgtagtgtcaagagtggggctaca
atagttattgatgaaattcaactttaccccccaggatacctagatttggtcatgttactg
ctgtcagagggcgtcaatgtagttgttgctggcgatccatgccaaagtgattatgatagt
gactctgataggcatatattcgctggagtggaaccagacattgtgcgtgttcttgagggt
gagaaatacaggtacaatctgttatcccacagattcaaaaatccaatgttcaaaggtaga
ctgccatgcagatttgctcgaggcaaggttgatgttaatgaggaggaatacaatttgtgg
gactcaattgctgagtttgcagcacaaaggtcaaagtctgttgaggtagttctggttgct
gggtttgaggaaaagcacattgtcaaggtttacatgcctacgatagagtgcttaacctat
ggtgagagcaccggaatgacttttaagcatggtgctgtgtacatttctgaagctggccgc
atgtgcagtgaaaagagatggataacggcattatcaagattttcatactgcattgacttt
atcaacggctcatgcgtagattacaatggattggctcaaatttacaacacaagagctcta
ggaaatttcctaatgaagagggctagtgagtcgttcatttttgatatgcttcctggtgaa
ccagtcttcaccgaaggttttggaacacaagttggaaaggattttggagtcaaggaggag
aagctgcagggtgatccatggcttaagacaatgatctttttgggccagcagtctgaccaa
gagatagaggaaatgcaggaggcgtttaagaatgagccatggttcaggacacatgttcca
atatttccagtcgaggctattcgggcaagatgggctcacaaaataatggacaaatatgcg
agagaattccgcattggccaagagattagcaatcagttcccagaggatcacagcaagaac
aatggagcaagaatgacaactgctgctgaccgatatgaagctatctacccaagacatagg
gggacggattctgtcacattcttaatggctgttcgaaaaagattgaccttttcaaaccca
cagaaggagtcagcaaagtttagagaggtgaggaactatgggttggtattcctaaaggag
ttcatgaagagggttcctcttaagaggtgctgggacccggttaaattttcagaggcgctt
caagactttgaagacaagaagacctcaaagtcagctgcaaccattgagaaccactctggc
aggtcatgcagggattggctatctgacatcgctgtgatatttatgaagagccaacactgc
accaaattcgagaagagatttgctgatgcgaaagcaggccagactcttgcttgctttcac
cactctgtcctgtgccgctttgcgccgtacatgaggtacattgagaagaaactttttgag
gctcttcccaaaaatttgtacatacactcagggaaagggttggatgagctaaatgaatgg
acaaaaatattcttcaatggggatgaatgcacagagtcggattatgaggcattcgatgca
tcacaggatcactacatactggcctttgaagttgcagtaatgaaattcttgaatatccct
ggggatatcgttgaggactacatcttcattaaaaccagacttgggtcaaagttggggaat
ttctcaataatgagattcactggtgaagcaagcacctttcttttcaacacaatggctaac
atgctcttcacatttctgaagtatgatttgaatggcagcgagggcatttgctttgcagga
gatgacatgtgcgccaataggagactgagggagaggaaaggctttgaaggactgatgaag
aagatgaagttgaaggccaaggtttgcttcacaaagaaccctactttctgtggatggtgc
atgagcccacaaggtatatacaagaagccccaacttgttcttgaaagaatgatgatagcg
agggagaccaataatctgcaaaattgcatggacaattatgcgattgaagtttcatacgct
tacagattgggcgagaaaattatcgggaggcttgaggaggaggaagcagaggcccattac
aactgtgtgaggttcattgtcaagaataagcatctgcttcgatcctctgttaggaatcta
tttagctgtgtgttatag
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