Vibrio gigantis: MID13_12725
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Entry
MID13_12725 CDS
T08202
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
vgi
Vibrio gigantis
Pathway
vgi00550
Peptidoglycan biosynthesis
vgi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MID13_12725 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vgi01003
]
MID13_12725 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vgi01011
]
MID13_12725 (mrcB)
Enzymes [BR:
vgi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
MID13_12725 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MID13_12725 (mrcB)
Glycosyltransferases [BR:
vgi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
MID13_12725 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
vgi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
MID13_12725 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ULN63782
LinkDB
All DBs
Position
1:complement(2870124..2872523)
Genome browser
AA seq
799 aa
AA seq
DB search
MMTKMLTPKKAPPKKAPAKKSPATKAKPRKPRAAAKKSKSKAKKSGKRGWLKILWGMSWK
AGLALAALLLFVGIYLDSVVKQRFEGQLFDLPTVVYARVLDLSPGTAVSLTQVKNELDVL
NYRKVNAPRHPGEYSSSSTKIEMIRRPFEFVDGPEADRHVMLHFNGNELTRIQSLEKKGD
MGYLRVEPKMLGMLEKSNDEQRLFLKRNQFPEVMVDALLATEDRNFYQHDGVSPLAIARA
MVVNVKAGRTVQGGSTLTQQLAKNLFLSSERTLWRKVREAYIALILDHRYSKDRILEAYL
NEVYLGQNGGQAIHGFGLASRLYFGQPIQELRIDQLALLVGMVKGPSYYNPVRYPERAKT
RRDLVLRLLMQQDILTPRQYEEAASRDLDIQDNPRIASRQPAYFQQVNIELKKYVGDRFE
AKKGIRVFTSLDPVSQDKLEKSIAHKVPDLSKTAGNKLEAAAIAVDRNTGEIRAMVGGKR
TGYDGFNRALNASRPIGSLVKPAIYLTALEQPDKYTLATTLMDTPLSLKGSKGSVWSPRN
FDRKFRGDVPLYVALSKSYNVPTVRLGMQLGIDSVSDTIGKLGVDKNEIRPVPSMFLGSF
SLTPFQVAQMYQTITNSGRIAPLSALRSVVDNDGEVLYQSIPRVSQSVDQQAAWLTTYAM
KRGVSEGTGRFLQGQFAWAGLAGKTGTSNDSRDSWFVGVDGREVTTIWLGRDDNKPTKLT
GSSGALRVYANYLKQRTPEQLILPWPNGIATASFTRTAQGALEFDCDGVVKLPVWDESGN
IKKSCESQPKQWLKKLFQW
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaaaatgttaacgccaaaaaaggcaccacctaaaaaagcgccagcaaagaag
tcaccagcgaccaaagccaagcctaggaaaccaagagcggctgcgaaaaagtccaaatct
aaggctaagaaatctggtaaaagaggttggttgaagatcctgtggggcatgtcttggaaa
gccggcttagcgctcgcggcattgctgttgttcgtcggtatttatcttgattctgtggtc
aagcagcgttttgaaggtcaattgtttgatttacctaccgttgtttatgctcgcgtgttg
gacctttctccgggtactgcggtgagtttgacacaggttaagaacgaactggatgtactt
aattaccgtaaggtgaacgctcctcgtcatcctggtgagtactcttcttcttcaaccaag
attgagatgatccgccgcccgttcgagttcgttgatgggccggaggctgaccgtcatgtg
atgttgcacttcaatggcaatgaattaactcgaatccagtcgctagagaaaaaaggcgac
atgggttatttgcgtgttgaaccgaaaatgctgggcatgcttgagaaaagcaacgatgag
caacgactatttttaaaacgtaaccaattcccagaagtaatggttgatgccttattggca
accgaagaccgaaacttctatcaacacgatggggtttcacctttggcgattgctcgtgcg
atggtggttaacgttaaggccgggcgtactgtacaaggtggtagtacactgacacagcag
ctcgcgaaaaacctgttcttatctagtgaacgcacactgtggcgtaaagttcgagaggcc
tacattgcgcttatcttggatcatcgctacagcaaagaccgtatcttagaagcttatttg
aacgaggtttatcttggccaaaatggtgggcaagcgattcatggtttcggcttggcgtct
cgcttgtactttggtcaaccgattcaagagctccgtattgatcagctagcactgcttgtt
ggtatggtgaaaggaccttcgtattacaaccctgtccgttatcctgagcgtgccaagact
cgacgagatctagttcttcgcttattgatgcagcaagacatattaactccgcgacaatac
gaagaagcggcgagtcgtgatttagatattcaagacaacccacgtattgctagccgtcag
cctgcttatttccaacaagtaaacattgagcttaagaagtatgtaggcgatcgatttgaa
gcaaaaaaagggattcgagtctttacctctctggatcctgtctcccaggacaagttagag
aagtcgattgctcacaaggtacctgatttatctaaaaccgcaggtaacaaattggaagct
gcagctatcgccgtggatagaaataccggtgaaattcgagctatggttggcggtaagcgt
actggctacgatggctttaaccgtgccttgaacgcgagtcgtcctattggttctttagtt
aagcctgcaatctacttaaccgcattggaacaacctgataagtacacacttgcgacaaca
ttgatggatacgccattaagcttgaaaggcagcaaaggaagtgtgtggagcccaagaaac
ttcgatcgtaagttccgtggagatgtgcccttgtatgtggcgctttctaagtcttataac
gtacctacggttcgtttaggtatgcagttaggcattgatagcgtctccgatacgattgga
aaactgggtgtcgataagaatgagattcgtccagtgccatcgatgtttttgggctcgttc
tcactgactccgttccaggtggcacagatgtaccaaaccatcaccaactctggccgtatc
gcacctttgtctgcgcttcgttcggttgttgataatgatggtgaggttctgtatcagtcg
attcctcgtgtatcacagagcgttgaccagcaagcggcttggctaaccacctacgcgatg
aagcgtggtgtgtcggaaggcacggggcgcttcctacaaggtcagtttgcatgggctggt
ttagccggtaaaacaggcaccagtaacgacagccgagacagctggtttgtgggggttgat
ggccgtgaagtaacaaccatctggttagggcgtgatgataataagccaactaaactaacg
ggctccagtggcgcgttacgtgtttatgccaattatctgaaacagagaacaccagagcag
ttaatattgccttggcctaatggaattgcgacggcaagttttactcgaaccgctcaaggg
gctttagaatttgactgtgatggtgtggttaaactaccggtttgggacgaaagtggaaac
attaaaaagagctgtgaaagtcaaccaaaacagtggctaaagaagctttttcagtggtaa
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