Vibrio gigantis: MID13_22615
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Entry
MID13_22615 CDS
T08202
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vgi
Vibrio gigantis
Brite
KEGG Orthology (KO) [BR:
vgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vgi03000
]
MID13_22615
Transcription factors [BR:
vgi03000
]
Prokaryotic type
Helix-turn-helix
Other families
MID13_22615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_2
HTH_30
AAA
AAA_5
Mg_chelatase
PAS_4
AAA_3
HTH_7
MCM
IclR
AAA_22
HTH_22
AAA_16
DUF2089
HTH_23
HTH_Tnp_IS1
HTH_28
DBI_PRT
HTH_50
NUMOD1
MurT_C
HTH_17
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ULN66360
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Position
2:1599768..1601558
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AA seq
596 aa
AA seq
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MQLQHTQNSDWLSCSWHRSTEAGLKQRRLPEDIRLPQSILKQRRHQSSDLIQIVERNALP
LFNQMFARTDSRLILTDIEGVILASWGQERFKEKLTSIALSSGACWQEQLKGTNAIGTAI
VEAKPVTIIGEQHFIHQHRFISCSASPVFDHQGQMVGVLDITSEQQQHDSSVQLLVQNMV
QLVENQLLSHIPQGTTRIDLACEKSLLHSGWQGIVIANEAGEVVAHNQVASQLLDQTSIV
GACIDTLFNRTSLDTSFVFEKQHLKRTTTKRTRSISASCDLHHGEQQIEHAWQQANKVID
KGISLLILGETGVGKGEFVKALHKQSQRKSSPLVAVNCGALPKDLIESELFGYAPGAFTG
ASHKGFQGKIRQADKGILFLDEIADMPLEAQCRLLHVLQDKSVVPVGSNQSYQVDCQIIA
ATHKNLEQLVATGEFRQDLYYRLNGLAFTLPSLQYRQDKHALIKNIHRKYAEDGQTICPH
LMSLLCAYSWPGNIRELDNLLKVTALLASDEPQVTLEHVPSHLAQHLTSLAQDSHHQITA
SRIIEGKSNADLRSTVEETLLQTYQANQGNISKTSRILGISRNTIYRKLKSLGILQ
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttcaacacacacaaaactcagattggctttcgtgctcttggcaccgcagcaca
gaagctggactaaaacaaagacggcttcctgaagatatacgcctaccacaatcgatcctt
aagcaacgacgtcatcaatcttctgacttgattcaaatcgtcgagcgcaatgcactgcct
ctgtttaatcagatgtttgcacgcaccgacagtcgcttgattttgaccgatattgaaggg
gtgattctggcgagttggggccaagaaaggtttaaggagaaactgacttcgattgcactt
agctctggagcgtgttggcaggaacaactcaaggggaccaacgcgattggcaccgccatt
gtggaagccaaaccagtgactatcattggcgaacagcacttcatccaccagcatcggttt
ataagttgttcagcaagcccagtatttgatcatcaaggccagatggttggggtgttggac
attaccagtgagcagcaacaacacgacagttcggtgcagctactcgttcaaaatatggtt
cagcttgttgaaaaccagctattgagtcatatcccacaaggcacgactcgtattgatctc
gcgtgtgagaaatcgttattgcacagtggttggcaagggatcgtaatagcgaatgaggct
ggtgaggtggtggcgcataatcaagtcgcctctcaattgctggatcaaacctcgatcgtt
ggtgcatgcattgataccctcttcaaccgaacttcattagacacctcatttgtgtttgaa
aaacagcacctcaaacgcacgacaaccaaacgcacacgttctatttcagcatcgtgtgat
ttgcaccatggcgaacaacagatagaacacgcttggcagcaagctaataaagtcatcgat
aaagggatcagcttgctgatcttaggtgaaactggcgttggaaaaggtgagtttgttaaa
gccttacacaaacagagccagcgtaaatcctcacccttagttgccgtcaattgtggagca
ctaccgaaagatcttatcgaatctgaattgtttggttacgcgccgggcgcctttacggga
gcaagccacaagggcttccaaggtaagatccgccaagcagataaagggattctatttcta
gatgagatcgccgacatgcctttggaggctcagtgtcgactactgcatgttctgcaagac
aaatccgtagtacctgtaggttcaaaccagagttaccaagttgattgtcagatcatcgct
gccacacataaaaacctcgagcagttagttgcgacaggagaatttaggcaagatctgtat
tacagactaaatggcttggccttcaccttaccaagcctgcaataccgacaagacaagcac
gctttaatcaaaaatattcaccgaaaatacgcagaagatggacagacgatctgccctcac
ttgatgagcttactatgcgcttattcttggccgggtaatatccgagaattagataactta
ctgaaggtcaccgccctactcgcgagcgacgaaccacaagtcactctagaacatgtacca
agccaccttgctcagcacctcacctctttagctcaagatagtcatcatcagattactgct
tctcgtatcatcgaaggtaagtcaaatgctgatttaagaagtaccgttgaagagaccttg
ctacaaacctatcaagccaaccaaggtaatatcagcaagacatcccgaatactgggcatc
agccgtaatactatttatcgaaaactaaagagtttggggattcttcaatga
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