Variibacter gotjawalensis: GJW-30_1_00992
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Entry
GJW-30_1_00992 CDS
T05320
Symbol
lcfB_1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00061
Fatty acid biosynthesis
vgo00071
Fatty acid degradation
vgo01100
Metabolic pathways
vgo01212
Fatty acid metabolism
vgo02024
Quorum sensing
Module
vgo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GJW-30_1_00992 (lcfB_1)
00071 Fatty acid degradation
GJW-30_1_00992 (lcfB_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GJW-30_1_00992 (lcfB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vgo01004
]
GJW-30_1_00992 (lcfB_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vgo04147
]
GJW-30_1_00992 (lcfB_1)
Enzymes [BR:
vgo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GJW-30_1_00992 (lcfB_1)
Lipid biosynthesis proteins [BR:
vgo01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
GJW-30_1_00992 (lcfB_1)
Exosome [BR:
vgo04147
]
Exosomal proteins
Exosomal proteins of breast milk
GJW-30_1_00992 (lcfB_1)
Exosomal proteins of breast cancer cells
GJW-30_1_00992 (lcfB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BAT58466
UniProt:
A0A0S3PR79
LinkDB
All DBs
Position
1034135..1035676
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AA seq
513 aa
AA seq
DB search
MRIEQFLTDSAATYADKTAIVADGPRLTYAELDDLSSRLAASLARNGVKRNDRVLIFMDN
CWEAVVSVFGVLKAGATFSPINQSTKADKLTFIVEDCEPSAILTQAKLMPVVTAALDGKA
DIFTASTHAPEGHCPRGASSLKDCFESEVREVEHGGIDMDLAMLIYTSGSTGRPKGVMMT
HRNCEAASGSITTYLENTPDDVILNVLPLAFDYGLYQMLMSVRVGATLVLERSFAFPQAI
FEVIRAEGVTGLPLVPTMAAMILQMRDLQPGFLPSLRYVTNTAAALPAAHIKRLRELFPG
VRLYSMYGLTECKRCTYLPPEQLDRRPNSVGIAIPNTEAFVVDDSGTPVAAGEIGELVIR
GPHVMQGYWRRKEATDHALRPGPNPWERVLYTGDLFRTDDEGFLYFVGRKDDIIKTRGEK
VAPKEVEAVLHAHPGIAEAVVVGLPDPVLGEAIAAFVVLSDPNLSEREIIRHCSRHLEDF
MVPKSIAFRTELPKTDTGKISRRLAAEAARVAQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtatcgagcaattcctcaccgacagcgccgcgacatacgcggacaaaaccgccatc
gtggcggacggcccgcgtttgacttacgcggaactggacgacctctccagccgtctcgcc
gcgtcgctcgcgcgcaacggcgtcaagcggaacgaccgcgtcctgatcttcatggacaac
tgctgggaagcggttgtttcggtgttcggggttctcaaagcaggcgccaccttcagcccg
atcaatcagtcgacgaaggctgacaagcttacgtttatcgttgaggactgcgagccgtcc
gcaatcctgacgcaggcgaagctaatgcccgtcgtgacggccgcgcttgacggcaaggcg
gatatcttcacggcgtcgacgcatgcgccggagggtcattgcccgcgcggtgcatcgtcg
ctgaaggattgtttcgaaagcgaagtgcgggaggtcgagcacggtggcatcgacatggat
ctcgccatgttgatctacacgtcgggttcgaccgggcggccgaagggcgtgatgatgacg
catcgcaattgcgaggcggcatcgggttcgatcacgacttatctcgagaacacgcccgac
gacgtcattctcaacgtgctgccgcttgccttcgactacggcctctaccagatgctgatg
tcggtgcgtgtcggcgcgacgttggttctggagcgcagcttcgcattcccgcaggcgatc
ttcgaagtgatccgcgccgaaggtgtgacgggtcttccgctggtcccgacgatggcggcg
atgatcctgcagatgcgcgaccttcaacccggctttttgccaagcctgcgctacgtgacc
aatacggcggcggcacttccggccgcacacatcaaacgcctgcgcgagctgtttccaggt
gtgcggctttattcgatgtacggcctcaccgagtgcaaacgctgcacgtatctgccgccc
gaacagctcgatcggcgcccgaattccgtcggcatcgcgatcccgaacaccgaagctttt
gtcgtcgacgatagcggcacacccgtcgctgccggcgagatcggcgaactcgttattcgc
gggccgcacgttatgcaaggatattggcgccgcaaggaagcgaccgaccatgcgctgcgt
cccgggccgaacccttgggagcgcgtgctctacaccggcgatctcttccgcaccgacgac
gagggcttcctctatttcgtcggccgcaaggacgacatcatcaagacgcgcggcgagaag
gttgcaccgaaggaagtcgaggcggtgttgcacgcgcatccgggtatcgcggaggccgtc
gtcgtcggcctacctgatccggtactcggcgaagccattgcggcattcgtcgtcctctcc
gatccaaatctcagcgagcgcgagatcattcgccattgctcgcgtcatctcgaagacttc
atggtgccgaagtccatcgcgttccgcaccgaactgccgaagaccgacacgggcaagatt
agccgccggctcgccgccgaagccgcaagggtagcgcaatga
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