Variibacter gotjawalensis: GJW-30_1_02943
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Entry
GJW-30_1_02943 CDS
T05320
Name
(GenBank) putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vgo
Variibacter gotjawalensis
Pathway
vgo00630
Glyoxylate and dicarboxylate metabolism
vgo00680
Methane metabolism
vgo01100
Metabolic pathways
vgo01120
Microbial metabolism in diverse environments
vgo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vgo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GJW-30_1_02943
09102 Energy metabolism
00680 Methane metabolism
GJW-30_1_02943
Enzymes [BR:
vgo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GJW-30_1_02943
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_8
Fer4_10
Fer4
Fer4_21
Fer4_9
Fer2
Fer4_2
Fer4_17
Fer4_6
Fer4_4
CDC48_N
Fer4_16
Fer4_18
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
BAT60406
UniProt:
A0A0S3PWT8
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All DBs
Position
complement(3016508..3019423)
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AA seq
971 aa
AA seq
DB search
MTNPSDQKPMGYGHDKKGAAGGENTGDGKPHVDHSAPVDKVAGVGQAGDAITFVLDGKEV
QASADETIWQVAQRCGTTIPHLCYSPEPGYRADGNCRACVVEIEGERVLAASCIRKPTAG
MKVKTQSERATAGRNMVLELLVTDQPKREVAHDPASKFWNWAAKMDVSVSRFPEREKIGA
DRSHPAMAVNLDACIQCNLCVRACREVQVNDVIGMAGRGHNEKIVFDFDDPMGSSTCVAC
GECVQACPTGALMPSTLVDENNIRTEAYFPDREVDSVCPYCGVGCQLTYNVKDDKLLYVT
GKAGPANESRLCVKGRFGFDYVSNPQRLTQPLVRKDGVPKRADDLVDPANPWTHFRVATW
EEAMERAAAGLVKVRDRDGPRALAGFGSAKGSNEEAYLFQKLVRTGFGSNNVDHCTRLCH
ASSVAALLEGVGSAAVTATFNECKNSDVIVVIGANPTENHPVAATFFKQAAKRGTKLIIM
DPRGTAMKRHAWKMMQFKNGTDVAMLNGLLNVIITEKLYDQQYVQTYTEDFEKLAESVKP
FTPEEMSPICGIEPDVLREVARTFARAESAIIFWGMGVSQHTHGTDNARCLIALSLICGQ
VGRPGTGLHPLRGQNNVQGASDAGLIPMFFPDYKSVENSEIRAKYEAAWGVTLDPKRGKT
VVEIMDAIHADEIKGMYIMGENPAMSDPDLNHARGALAHLEHLVVQDIFLTETASYADVI
LPASAWPEKNGTVTNTNRQVQMGRAAIPLPGEARQDLWIIQDLAQRIGCDWNYTDVSQVF
TEMSSLMPALANISWDRVAREDHVTYPVDGPDVSGRDVVFDKGFPREGGVAKLVATRYTA
PDEVPDAEYPFILSTGRQLEHWHTGSMTRRATVLDALEPTAIAQLSRGTISKLGIQPGDM
VRVSTRRGTVSLAARQDDAVPDGVVFIPFAYVEAAANLLTNPALDPFGKIPEFKFCAAKV
ERDEPIHEAAE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatccgagcgatcaaaagccgatgggctacggccacgacaaaaaaggcgcggcc
ggtggagagaacactggcgatggcaagccgcacgtcgatcacagcgcgccggtagataag
gtcgcaggcgtgggccaagctggcgatgcgatcacttttgtgctggacggcaaagaggtt
caagcgagcgccgatgaaacgatctggcaagttgcgcaacgctgcgggaccacgatcccg
cacctttgctattcgccggagcccggttaccgcgccgatggcaactgccgcgcctgcgtg
gtcgagatcgaaggcgagcgcgttctagccgcaagctgcattcgcaagccgaccgccggc
atgaaggtcaaaacgcaaagcgagcgcgccaccgccgggcgcaacatggtgctcgagctt
ctggtgacggaccagccgaagcgcgaagtcgcacacgaccctgcgtcgaagttctggaac
tgggcggcgaagatggatgtgtccgtcagccgttttccggagcgcgagaagatcggcgcg
gatcgcagccatcccgcaatggccgtcaacctcgatgcatgtatccagtgcaatctgtgt
gttcgagcttgccgcgaagttcaggtgaacgacgtcatcggcatggcgggccgcggtcac
aacgaaaaaatcgtattcgatttcgacgacccgatgggcagctccacctgcgtggcgtgc
ggcgagtgcgtgcaagcgtgcccgactggggccctgatgccgtcgacactcgtcgatgag
aacaacatccgcaccgaagcatatttccccgatcgcgaagtcgatagcgtctgcccctac
tgcggcgtcggttgccagctcacttacaatgttaaagacgacaagctgctctacgtgacc
ggcaaagcgggtccggcgaacgagagccgtctttgcgtgaaaggccgcttcggcttcgat
tacgtcagcaatccgcaacgtctaacgcaaccgctcgtccgcaaggatggcgtgccgaag
cgcgctgatgacctcgtcgatcccgctaatccgtggacgcatttccgggtcgccacgtgg
gaagaagcgatggaacgcgccgcagccggtctcgttaaggtgcgcgatcgcgatggtccg
cgcgcgctcgccggtttcggttctgcgaaggggtcgaacgaagaagcgtatctcttccag
aagctcgtccgcactggcttcggttcgaacaacgtcgatcactgcacgcgtctgtgccac
gcctcgtccgttgccgcgctgctcgagggcgttggatcggctgccgtcaccgcgacgttc
aacgaatgcaagaattccgacgtcatcgtcgtcatcggcgctaacccgaccgagaaccat
ccggtggcggcgacatttttcaagcaagccgcgaaacgcggcaccaagctcatcatcatg
gatccgcgcggcacggccatgaagcgtcatgcttggaagatgatgcagttcaagaacggc
accgacgtcgcgatgctcaacgggcttttgaacgtcatcatcaccgagaagctttacgat
cagcagtatgtgcaaacctacacggaagacttcgagaagctcgccgaaagcgtaaagcct
ttcacgcccgaagaaatgtcgccgatctgcggcatcgaaccagacgtcctgcgcgaagtc
gcgcgcacgtttgcgcgtgccgaaagcgcgatcatcttctggggcatgggcgtctctcag
cacacacacggcaccgacaatgcacgctgcctgatcgcgttgtcgctaatctgcggccaa
gtcggccgcccaggcaccggactgcatccacttcgtggacagaacaacgtgcagggtgcg
tcagacgcgggcctgatcccgatgttcttcccggactacaagtccgtcgagaactccgaa
attcgcgccaaatacgaagcagcttggggcgttacgctcgacccgaagcgcggcaagacc
gtcgtcgagatcatggacgcgatccacgcggacgaaatcaagggcatgtacatcatgggc
gagaaccccgcgatgtccgatcccgatctgaaccacgcgcgcggcgctctcgcgcatctc
gaacatctcgtcgtgcaggacatcttcctcaccgagacggcgtcatatgcggatgtcata
ttgccggcgagcgcgtggcccgaaaaaaacggcaccgtcaccaacaccaaccggcaagtc
cagatgggacgtgctgctattcctctgccgggtgaggcgcgacaagatctctggatcatc
caagacttggcgcagcgtatcggctgcgactggaactacacagacgtgagtcaggtcttc
accgagatgtcgtcgttgatgccggcgcttgccaatatctcctgggatcgtgtcgcgcgc
gaagatcacgtcacctatccggtcgatggaccggacgtgtctggtcgcgatgtggtgttc
gacaagggctttccgcgcgaaggcggcgtcgcaaaactcgttgccacgcgctacaccgcg
ccggacgaagtaccggatgccgagtatccgttcattctctcgacaggacgccagctggag
cactggcacaccggctccatgacacggcgcgcaacggtgctcgatgcattggagccgacg
gcaatcgcgcaactttcgcgcggcactatttcgaagctgggcatccagcccggcgacatg
gttcgcgtctcaacgcgtcgcggaacggtgagcctcgctgcgcgtcaggacgatgccgtc
ccggatggagtggtcttcattccctttgcctacgtcgaagcggcggcaaacctgctgacg
aacccagcgctcgacccattcgggaaaattccggagttcaaattctgcgccgcgaaggtt
gaacgcgacgaacccattcacgaagccgcggagtaa
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