Vibrio campbellii ATCC BAA-1116: VIBHAR_05253
Help
Entry
VIBHAR_05253 CDS
T00589
Name
(GenBank) hypothetical protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vha
Vibrio campbellii ATCC BAA-1116
Pathway
vha00500
Starch and sucrose metabolism
vha01100
Metabolic pathways
vha01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VIBHAR_05253
Enzymes [BR:
vha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
VIBHAR_05253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
hDGE_amylase
Cyc-maltodext_C
Motif
Other DBs
NCBI-ProteinID:
ABU73159
UniProt:
A7N642
LinkDB
All DBs
Position
II:501532..502881
Genome browser
AA seq
449 aa
AA seq
DB search
MSGLQETQSTGANVILHAFDWKYADIAQRAAEISELGYGSVLVSPPMKSAQDERWWQRYQ
PQDYRVIDNALGNTTDFKNMVEALDRVGVLVYADVVFNHMANEAHLRSDLQYPRQAVMDD
YQQNASKYQDLILFGDLSEPLFDENDFVEAFGIKDWKDKWEVQNGRISGGPTDPGLPTLR
VCKHVVEQQRTYLKALKALGVKGFRIDAAKHMTLEHLKLVWTEDITQDVHIFGEIITDGG
ATEEEYELFLEPYLKETRLGAYDFPLFSTIFKAFSKKGSFKSLIDPYCFGQALSNRRAIT
FAITHDIPNNDVFLDLVMDEENEWLAYAYILGRDGGVPLIYTDLDTSGIKGVDGKPRWQN
AWKDARMAKVVAFHNLVHGEPMTVLEGNDDMLVLQRGEKGILVLNKSARAQSLQLTVNKA
LVDMMTGEEVPSGEEIKVAAKSAMLLVEK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcttacaggaaacacaatcaacaggtgcaaatgttatcttgcacgcttttgat
tggaagtatgctgacattgcccaacgcgcagcggagatcagcgagctaggttatggctcg
gtattggtttctccgccgatgaaaagcgcacaagatgaacgctggtggcagcgttaccaa
cctcaagattatcgtgttatcgacaatgcgctcggtaataccacagattttaaaaacatg
gttgaagcactcgaccgtgtaggtgtattggtttacgccgatgtcgtctttaatcacatg
gcgaacgaagcccatctacgctcggatttacaatatccgcgccaagccgtgatggacgat
taccaacaaaatgcaagcaagtatcaagatctgattctattcggtgacttgtcagaaccg
ctgtttgatgagaatgacttcgttgaagcttttggcatcaaagattggaaagacaagtgg
gaagttcaaaatggtcgaatctcaggcggtccaaccgatcctgggttgccgactttacgt
gtatgcaagcatgttgttgagcagcaacgtacttacctgaaagcgcttaaggctctgggc
gtgaaaggtttccgtattgatgccgcaaagcacatgacgttagaacatctaaaattggtt
tggaccgaagacatcactcaagacgtccatatctttggtgaaatcatcacagatggtggc
gcgacagaagaagaatatgagctgttcctagaaccgtatttgaaagaaacacgtttaggt
gcatacgattttccgttgttctctaccatctttaaggcgttctctaagaagggcagtttt
aagtctttgatcgacccgtactgttttggtcaggctttatctaaccgtcgagctattact
ttcgcgattactcatgatattccaaacaatgatgtgttcttggatttagtcatggatgaa
gagaacgaatggctagcgtatgcctacattctgggacgcgatggcggtgttccgcttatt
tacacggatttggacaccagtggtatcaagggcgtggacggtaaaccaagatggcagaat
gcgtggaaggacgcacgtatggcaaaggtggtggcattccataatcttgttcatggcgag
ccaatgacggtactagaaggtaacgacgacatgttggtacttcagcgcggcgagaagggc
atcttggtactcaacaaatctgcgcgagcgcaatcactgcagctgacagtgaacaaggct
ctggttgatatgatgaccggagaagaagtgcctagcggtgaagagattaaagtggcggcg
aaatcagcaatgctgcttgtagaaaagtaa
DBGET
integrated database retrieval system
