Vibrio harveyi: AL538_14695
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Entry
AL538_14695 CDS
T04380
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vhr
Vibrio harveyi
Pathway
vhr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL538_14695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vhr03400
]
AL538_14695
Enzymes [BR:
vhr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AL538_14695
DNA repair and recombination proteins [BR:
vhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AL538_14695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
DUF5736
Motif
Other DBs
NCBI-ProteinID:
AMF98870
UniProt:
A0A454B9N4
LinkDB
All DBs
Position
1:complement(3127751..3128557)
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AA seq
268 aa
AA seq
DB search
MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIDDVEAMGYKVYFHGQK
AHYGVAMLCKQEPISIQKGFPTDNEEHQKRMIMATFEDENGEKVTVLNGYFPQGDNVAHE
TKYPYKRQFYKDLMTYLNDHHTNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF
QPEEREWLQTLLDWGFEDTFRNLHPEVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAE
KCIESDIDYELRGIEKPSDHAPIWSTFK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaattagctttaacatcaatggacttcgtgcgcgtctgcatcaactccaagcc
ctcatcgacaagcaccaacctgacgtgattggtctgcaggaaatcaaagttcacgacgaa
gccttccctatcgacgatgtagaagcaatgggatacaaagtttactttcacggtcaaaaa
gcccattacggtgtggcaatgctatgtaaacaagagcctatcagcattcaaaaaggtttc
ccaaccgataatgaagaacaccaaaagcgcatgatcatggcgacgtttgaagatgaaaac
ggtgaaaaagtgacggttcttaacggttatttcccgcaaggcgataacgttgctcacgaa
actaagtatccatacaagcgtcagttctacaaagacttgatgacttacctcaacgatcac
cacactaacgatgagcagctgattgtcatgggcgacatcaatatcagcccaatcgacgcg
gacatcggtatcggcgaaccaaaccgtaaacgttggctgaaaacgggtaaatgttctttc
caaccagaagagcgtgagtggttgcaaacgcttctagattggggctttgaagatactttc
cgtaacttacaccctgaagtcgatgaccgcttctcgtggtttgattaccgttcgcgtggc
ttcgatgataaccgtggtcttcgtattgatgttattttggcaacaccatcactcgcggaa
aaatgcatagaatccgatattgactatgagttacgaggcattgaaaaaccttcagatcac
gcgccaatctggtcaaccttcaagtag
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