Virgibacillus sp. 6R: BKP57_03760
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Entry
BKP57_03760 CDS
T04596
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vig
Virgibacillus sp. 6R
Brite
KEGG Orthology (KO) [BR:
vig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vig03400
]
BKP57_03760
Enzymes [BR:
vig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKP57_03760
DNA repair and recombination proteins [BR:
vig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BKP57_03760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
API91049
LinkDB
All DBs
Position
complement(809171..812668)
Genome browser
AA seq
1165 aa
AA seq
DB search
MGLRFITGRAGTGKSGRIFDEIKEKLLNRPQGSAIFCIVPDQMTFQQEYKLFKDQAIRGS
IRAQVVSFSRLAWRVLQATGGGNKQFISTVGMQMMLRKIMEEKQGEWHVFQHAMEKHGFI
DQLETMITEFKRYAITPELLHAKIEHMNSYVHKEAGEEGLIHKLEDLLYIYEKLLFSLQG
KYMDGEDQLQLLAEKIAHSSLLEEAEIYVDGFYRFTPTELMVVEALIKKCKQVTIALTVD
KPEEEPASEVDLFYQTKETYHLLKQMAASVDVAIEETIELDPKYGRFRERAYFAHLEKYF
DERPAPAYHGQVPLQIAEAVHPRAEVEGAAQQIIHLVRDKGYRYQDIALFIRQPDMYHDL
IATIFHDYDIPVFIDEKRTMLNHPLMEFIRSSLDVVEGNWRYDAVFRLLKTGFIPSRDKQ
YPLTADAIDELENYVLEYGVRSRTSWFSEKEWVFQRFRGFDQTAQTDIEREMQIRINRYR
DQVTEAFEWFDKEMREAQTVTDRCTCLYQLLEELQVPARLEQMRAEYDEQFEIEKGREQE
QVWDAVIQLLDEIVEIAGEEAMSLTVFRKTLEAGLNTLKFAHVPPSIDHVIVGSIDRSRI
SDIRCAFLLGVNEGMWPMKPPADGLINEQERDLLAGHGVQLAETSKRQLLDDWFYMYVSF
TVASDQLWISYPLSDEEGNTKMPSQLIKRMESLFPNCCEHLLLQEPDELLEADRFVTTPN
KTRAALTAQLSRYRKGYPIKPIWWHVLNWYIKHEEKYATTYRILQSLYYQNKPSNLSKET
VEQLYPKQIKASVSRLETYYRCSYQHFAKYSLGLEERRTYKLDAPDIGQLFHEALKTITE
WVQKGEKDFSQLTQADANSYAHQAVTKLSPILQHQILHSSNRYQYIQQKLEEVIARATYV
LSEQARKSHFSPVGLELGFGNNQDLPPLTIPLRNGFELMLRGRIDRVDKAVKDDDLFLRI
IDYKSSAKELNLLEVYYGLALQMLAYLDVVITYSEQWLGVKATPAGVLYFHVHNPMIAEK
DKLDDATIEKELFKKYKMQGLLLADEDIAKLMDIALESGTSQIIPAAIKKNGGFYSYSRI
ADEQTFKSLQQHVHHLMVQAGMDMTHGGIHLNPYYYKQQVACTHCPFQSVCQFDPTIPTN
NYRKLTDMKQDEILKQIRQKEEPTW
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggggcttcgctttataacaggtcgtgctggtacagggaaaagcggccgaatatttgat
gaaataaaggagaaattattaaatcgcccacaaggttcagccattttttgtatcgttcca
gatcaaatgacgtttcagcaggagtataagctgtttaaggatcaagcaatccgcggaagt
atacgtgcacaggtggttagcttttctcgcttggcttggcgagtcttacaagcaacaggt
ggtgggaataagcaatttattagtactgtagggatgcaaatgatgctgcggaagatcatg
gaagaaaagcaaggagagtggcatgtttttcaacacgctatggaaaaacatggatttatt
gaccagctggaaacgatgattactgaatttaaacgctatgcaattacgcctgaattattg
catgccaaaatagagcatatgaacagctacgtacataaagaggccggggaagagggtctg
attcataaattggaagacttgctgtatatttatgaaaagttactattttcattgcaagga
aaatatatggacggtgaagatcaattacagttgcttgcagaaaagatcgctcattcttcg
ttacttgaagaagcagaaatctatgtggacggtttttatcgttttacacctaccgaatta
atggtagtagaagcgttgataaaaaagtgtaagcaagtaacgatcgcgttaactgtggat
aagccagaagaagaaccagcatcagaagtggatttgttttaccaaacaaaggaaacatac
catctattgaagcaaatggctgcttcggtagatgtagcaatagaagagaccattgaacta
gatccgaaatatggacgctttcgggagcgtgcctattttgcgcatttggaaaaatacttt
gatgaacgcccggcaccagcttaccatgggcaagtgcctttgcaaattgctgaggcagtc
catccgcgggcagaggtggagggagcagcacagcaaattattcatttagtaagagacaaa
ggctatcgttatcaagatatcgccttattcataaggcagccagacatgtatcatgatttg
atcgcaacgatttttcacgattatgatatacctgtatttattgacgaaaaacggacgatg
ttaaatcatcctttaatggaatttatccgctctagtttggatgttgtggaaggcaattgg
cgttatgacgctgtttttcggttgttaaaaacaggctttatacctagtagggataagcaa
tatcctttaactgcagacgccatagatgaattggaaaattatgttttggagtacggtgtt
cgttcacggacgagttggttttctgaaaaagagtgggtttttcagcgtttccgtgggttt
gatcaaacggcacaaacagatatagagcgggaaatgcaaatacgaattaatcgttatcgg
gaccaagtaacagaagctttcgagtggtttgataaagaaatgagagaagctcaaacggta
acagatcgatgtacctgcttgtatcagctattggaagagctgcaggtccctgcaagattg
gagcaaatgcgagcagaatatgatgagcaatttgagattgaaaagggacgagaacaggaa
caagtgtgggacgcggtcattcaattattggatgagatagtggaaatagcaggagaagaa
gccatgtcattgaccgtatttcgtaaaacactggaagcaggtctaaacacattgaagttt
gcccatgttccaccaagtatagatcatgttatcgtaggttccattgaccgttcaagaata
agcgatattcgatgtgctttcttactaggtgtaaatgaaggcatgtggccaatgaaaccg
ccagcggacggattgataaatgaacaggaacgggatttactagctggtcatggtgtgcag
cttgccgagacaagtaaacgccagttattagatgactggttttatatgtatgtgtctttt
acagtagcaagcgaccagctatggatcagctatccgttaagtgatgaggaaggaaacacg
aaaatgccgtcccagcttatcaaacggatggaaagtttgtttccaaactgttgtgaacat
ttattgctgcaagagccagatgaattgctagaagcggaccgttttgtgactacacctaac
aaaacaagagctgccttaacagcgcagctatcaaggtatcgcaagggctatccgataaag
ccaatctggtggcatgtacttaattggtatatcaaacatgaagaaaagtacgctacgaca
tatcgtattttgcaaagcttatattatcaaaataaacctagtaacctatcaaaagagacc
gtagagcagctttatccaaagcaaataaaagcaagtgtttccagattagagacttattat
cgctgttcctatcagcattttgccaagtacagtctaggtttggaagaaaggcgcacatac
aaactggatgcacctgatattggtcagttgtttcacgaagcactaaaaactattacggaa
tgggttcaaaaaggggaaaaagatttttctcaactgacgcaagcggatgcaaattcgtat
gcacatcaggcagtaacgaagctgtctcctatattacagcatcaaatcttgcatagttcg
aatcggtatcagtatattcaacagaagttagaagaagtgattgcaagagcgacttatgtg
ctaagtgaacaagcgagaaaaagtcacttttctccagtaggtctagaattgggatttgga
aacaaccaagatttaccgccattaaccattccgttaagaaatggctttgaattaatgctt
cgcggccggatcgaccgtgttgataaagcagtaaaagatgatgatttatttttacgaatt
attgattataaatcgagtgccaaagaattaaatctgcttgaagtatactatggattggct
ttgcaaatgttagcttatctggatgtagtcattacttattcggaacaatggctaggagtg
aaagcaacaccagcgggagtgctgtacttccatgtacacaatccgatgatagcggaaaag
gacaagctcgatgatgcgacgattgaaaaagaattatttaaaaagtacaagatgcaaggt
cttttgttagcagatgaagatatagctaagctaatggatatagcattagaatctggtacg
agccaaatcattccagctgccatcaagaaaaatggcggattttacagttattcgagaata
gcagatgagcagacgtttaagagcttgcagcagcatgttcatcacttgatggtacaagca
ggaatggatatgacacatggaggaatacatttaaatccgtattattataaacagcaagtt
gcttgtacgcattgtccatttcagtcggtatgtcaatttgatccgacgataccaactaat
aactatcgaaaactaacagatatgaaacaggatgagatactgaaacagattcggcagaag
gaggaacctacatggtga
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