Varroa jacobsoni: 111271386
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Entry
111271386 CDS
T07417
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
vja
Varroa jacobsoni
Pathway
vja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111271386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vja03041
]
111271386
Spliceosome [BR:
vja03041
]
Common components
Common spliceosomal components
SR proteins
111271386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
BRAP2
SET_assoc
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111271386
NCBI-ProteinID:
XP_022707868
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MSSRIFVGHLPREVDSRDIEDYFDRMGRIRDVVHKGNYAFVEYNDERDARDAISELNGVS
WKGERLIVELANRPRNRSRSRSRSRRRGGRRRNRITRGPPRRTDYRIDIKNLSTRVSWQD
LKDIFGEVAKVVYADAHNKKKNVGLVEFDTKEEMHRCYDKFNGKSFNGRKIEMELNVRSR
HSSRSRSHSRSRSRSRSSRRSRSRSRSRRHSRSRSRGSRRRSRSRSRGSRRRSRSRSRSE
RSRSRSRSRSKDRLSRSKSRNNNSTKQRSKSREPKKSSRSRSQSREDKRGAISDRSRSPH
SRSKSPADAKKQLAGERSASKEKQRSRSRSVESTKKRAESGSRSRSRSRSRSAEKRESRS
RSRSRGSRSRSRSPGGGGDKRSRSASVDDRASRSGSRGRAKRLRSSRSRSDSRSHSPTPN
GKDHHRSRSRSSSGSLPRQKINDEVGDNSP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccgtattttcgtcgggcatctgccgagggaagtggatagccgcgatatagaa
gactactttgatcgtatgggccgcattcgcgatgtcgttcacaaaggcaattacgctttc
gtggaatataatgatgaacgtgatgctcgtgacgcgatctcagagctcaacggtgtctcg
tggaaaggggagcgcctgattgtggaactcgctaatagaccacgcaaccgaagccgcagc
cggtctcgttcacgtcgccgaggaggacgccgaagaaatcgtatcaccaggggtccgcct
cgccgcacggattatcggattgatataaagaacctcagtacccgtgtttcttggcaggat
ctcaaggacattttcggagaggtagccaaggttgtctacgctgatgcgcataacaagaaa
aaaaatgtgggacttgtcgaattcgacaccaaagaagagatgcatcgttgctacgacaaa
ttcaatggcaagtcgttcaatggacggaagatcgaaatggagctaaacgtgcgcagccgt
cactcttctcgatcgcgcagccacagccgctctcgaagccgttcgaggtcctcgcgccgt
tcacgatcccgcagtcgatctcgacgtcattcgcgtagtcgctcacgaggctcgaggcgg
cgttcacgaagccgctcgcgcggttcccgacgtcgctcccgcagcaggagccgatctgaa
cgatcgcgctcccgcagcaggagccgctcgaaggaccgcctttctcgatcaaagtcgcgc
aacaataacagcactaaacaacgatcaaagtcgcgcgagccgaagaagtcgtcgagatct
cggtcgcaatctcgagaggataagagaggagcgatttccgaccgttccaggtcgccgcat
tctcggtcgaaaagcccagctgacgcgaagaaacagttggctggtgaacgttctgcaagc
aaagagaagcaacgctcaaggagtcgtagcgttgaaagcactaagaagcgggcagagtca
gggtcacggtcgaggtctcgctcgaggtcaagatcagctgaaaaacgcgagtcacggtct
cggtcgagatcccgtggctcgagatcgaggtcacgttcgcccggcggcggtggcgataaa
cgatcacggtcagcttcggttgatgaccgagcctcgcgatcggggtcacgcggacgcgcg
aaaaggctccgaagctctcgttcccgatctgattcgcgatcacattcacctacgccaaac
ggaaaggaccatcatcgtagccggtcaagaagttcttcaggatcacttcccagacaaaag
atcaacgatgaggtcggcgataattcgccgtag
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