Varanus komodoensis (Komodo dragon): 123019197
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Entry
123019197 CDS
T07701
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
vko
Varanus komodoensis (Komodo dragon)
Pathway
vko03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vko00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123019197 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vko03041
]
123019197 (PRPF40B)
Spliceosome [BR:
vko03041
]
Complex A
U1 snRNP components
U1 related factors
123019197 (PRPF40B)
Complex B
123019197 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
DUF4936
DTW
Motif
Other DBs
NCBI-GeneID:
123019197
NCBI-ProteinID:
XP_044277804
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MSAPDSGSVPPPGQPAPFPPAPPPPPILPPPFMPPPGIPPPFPPMGLPPMGPRPPPMPPM
PPGMMPPPPLIPPMPGPPPLGQMPAMVPPMLPGMMMPGVPAGPVPVSGGAAPATDPSSAP
VTQAAPVIPNPLTAAMQQNVIVGSSAVLDTGRKKPAWSEHRAPDGRVYYYNSETKQSSWE
KPDDLKSKAELLLSRCPWREYRSETGKPYYYNTQSKESRWTRPRELDDIEALIKEEEEDA
ERQQQPQPPEASLSGPASPSPSSAATSDTEGTGGVEGRETPGTEGAPTAAEEEVTSSCDP
ARRDEDDRATGNAWSNKEEAKQAFKELLKDKGVVASASWEQAMKLISSDPRFSALPKLSE
KKQAFNAYKAQRDKEEKEEARLRAKEAKEELQRFLEQHSKMSSTTRYRKAEQMFGELEVW
AMVPERDRKEIYDDVLFFLAKKEKEHAKQLRKRNIQALKSILDNMSCVSFQTTWSEAQQY
LMDNPSFAEDEDLQNMDKEDALICFEEHIRTLEREEEEERERGRLRERRQQRKNREAFQA
FLDELHECGRLHSMSTWMELYPSLSTDRRFANMLGQPGSTPLDLFKFYVEDLKARFHDEK
KIIKDILKDRSFSVEVNTTFEDFAHVISFDKRAATLDAGNIKLTFNSLLEKAEARERERE
KEETRKMRRKEAAFKSMLRQAAPPLEPSTAWDEVRERFVNHIAFEQITLESERIRLFREF
LQLLETECQHFHAKAKKHAKKPKKHHRKRSASGSESGSDHPHRTAKRKKRNHSESAGSGA
SSSPDSEHSTRRSKRQKKKSKKKRHKSNSPESEAEHKKEPSQPDEWEREKAPPRPEGRGH
SPPRGTRRERVRGGGRKPGSKTGVRSPTRPGAQLALRRSPWGRAPVVGGARRPACFH
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccagattcaggcagtgtccctccccctgggcagccggccccatttccccct
gccccaccgccgccaccaattctgccgcctccctttatgcctcctccaggaataccaccc
ccattccccccaatgggattgcccccaatgggaccacggccaccccctatgccacccatg
ccccctggcatgatgccgcctcccccactgatcccacccatgcctggaccaccacccctg
ggacagatgcccgcaatggtgccaccaatgctgcctggaatgatgatgcccggggtgcca
gccgggccggttcccgtctctggaggggcagcccctgcgacagacccatccagtgccccc
gtgacccaggcagcacctgtgatcccaaatccattaactgctgccatgcaacagaacgtg
attgtcggcagctcggcagttctggacacaggccggaagaagcctgcttggagtgaacac
agggccccagatgggcgagtttattactataattctgaaaccaaacaatcaagctgggaa
aagcccgatgatcttaagtccaaggcagagctcttgttgtcacgctgcccctggcgtgag
taccgctccgagactgggaagccctattactacaacacacagagcaaggagtcacgctgg
acccggccccgggagctcgacgacattgaagcattgatcaaggaagaagaagaggatgca
gagagacaacagcagcctcagccgccggaagcctcgttgtctggcccggccagccccagc
ccatcatctgcagccacctcggacacagaaggcactggtggtgttgaaggacgggagacg
cctggcacggagggggcccccactgcagcggaggaggaggtcacaagcagttgtgatccc
gcccggagagatgaagatgatcgtgctactggcaatgcctggagcaacaaggaagaagcc
aagcaagcttttaaggagctgctcaaagacaagggagtcgtggcaagcgcctcatgggag
caggccatgaagctcattagcagtgatccacgcttcagtgccttgcccaagctaagcgag
aagaagcaggccttcaatgcctacaaggcccagcgggacaaagaggagaaggaggaggcc
cggcttcgggccaaggaggccaaggaggagctacagcgcttcctggagcagcacagcaag
atgagctccaccacccgctacaggaaagctgagcagatgtttggggaactggaagtgtgg
gccatggtgccagagcgcgatcgcaaggagatctacgatgatgttctctttttcctggcc
aagaaggagaaggagcacgccaagcagctgcgcaagaggaacatacaggcgctgaagagc
atcctggacaacatgagctgtgtcagcttccagaccacctggtccgaggcccaacagtac
ctgatggacaaccccagctttgcagaagatgaggacctgcaaaacatggacaaggaggat
gccctcatctgctttgaggaacacatccggacgctggaaagagaggaggaggaggagcgc
gagcgagggcgtctgcgagagaggcgccagcagcgcaagaacagggaggccttccaggcc
ttcttggacgagcttcatgaatgcgggcgcctgcactccatgtccacttggatggagctg
tacccctccctcagcactgacagacgctttgccaacatgttgggccagcctggctccacc
ccgctggaccttttcaagttctatgtggaggatctgaaggcccgcttccatgacgaaaag
aagatcatcaaggacattctgaaggaccggagcttcagcgtggaagtcaacacaaccttt
gaagactttgcccacgtcatcagcttcgacaagcgtgctgccacactggatgctggcaac
attaagctgactttcaacagcctgctggagaaggccgaggcacgggagcgtgaacgggag
aaggaagaaacacgcaagatgcggcgcaaggaggccgcgttcaagagcatgctgcggcag
gcagctcccccactggagccgagcaccgcctgggatgaggtccgagagcgcttcgtcaat
cacatcgcctttgagcagatcacgctggagtcagagcggatccgcctcttccgcgagttc
ctgcagctgctggaaacggagtgccagcatttccatgccaaggccaagaagcacgccaag
aagcccaagaagcaccatcgcaagcgctcggcttcgggctcagagtcaggctcagaccat
ccccaccgcacagccaagcgcaagaaacgaaaccattcggaatcagctggctcgggggca
tcttcctctccggattcagagcacagcaccaggcgttccaagaggcagaagaagaaaagc
aagaaaaaaagacacaagtcgaacagccctgaaagcgaagctgagcacaagaaggagcca
agccaacccgacgagtgggagcgagagaaggcccctccgcggcctgagggaagaggccac
tcccctccccgaggcaccaggagggagcgggtgagaggtggcggccggaagccaggctcc
aagacaggcgtgcggagccccaccaggcccggggcccagctcgccctgcggagaagcccg
tggggccgcgctccggtggtgggcggggccagaaggccggcgtgctttcactaa
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