Vulpes lagopus (Arctic fox): 121485646
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Entry
121485646 CDS
T07435
Symbol
SIX5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vlg03000
]
121485646 (SIX5)
Transcription factors [BR:
vlg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
121485646 (SIX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121485646
NCBI-ProteinID:
XP_041602221
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All DBs
Position
2:166401299..166406002
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AA seq
740 aa
AA seq
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MATLPAEPSAGPAAGGEAVAAAATEEEEEEARQLLQTLQAAEGEAAAAAAAGAGEAAAGA
EGPGSPGVPGSPPEAAAEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLR
GSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG
AVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLS
LTQVSNWFKNRRQRDRTGGGGGAPCKSESDGNPTTEDESSRSPEDLDRGVAPVAAEAPAQ
GSLFLAGAAPPAPCPASSSILVNGSFLAAGSPPAVLLNGSPVIINSLALGEASSLGPLLL
AGGSGAPPTQPGAPGAGEGKTSLVLDPQTGEVRLEEAPPEASETKEAQVAASGTPAEEAA
GPLPQVVPGPPPAATFPLPPGPVPSVAAPQVVPLSPPPGYPAGLGPASPLLNLPQVVPTS
QVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSAAAPGNFLLA
NPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKPDAAISVPEGALPV
APSPALPDVHALGPLSAQQPPQPPPGPATAAAATSLPFADSSALLPGFPAPPPEGLMLSP
AAMPIWPAGLELSGGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGSAAGGEADEGLE
AEPKVLTQLQSVPVEDSLEL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgcctgcggagccgagcgcggggccggcggccgggggggaggcggtggcg
gcggcggcgaccgaagaagaggaggaggaagcgcgccagctcctgcagactttgcaggcg
gccgagggtgaggcggcggccgcggccgcggccggggcgggcgaagcggcggcgggagcg
gagggcccgggatccccgggcgtccccgggtcgccccccgaggccgctgccgagccgccc
acgggcctccgcttctcgccggagcaggtggcgtgcgtctgcgaggcgctgctacaggcg
ggccacgccggccgcttgagccgcttcctgggcgcgctgcccccggccgagcgcctacgt
ggcagcgatccggtgctgcgcgctcgggccctggtggccttccagcggggcgagtacgcc
gagctctaccggctgctcgagagccgccccttccccgccgcccaccacgcctttctgcag
gacctctacctgcgcgcgcgctaccacgaggccgagcgggcccgcggccgcgcgctgggc
gcagtggacaagtaccgtctgcgcaagaagttcccgctgcccaagaccatatgggacggc
gaggagaccgtctactgcttcaaggagcgctcccgcgccgcgctcaaggcctgctatcgc
ggcaaccgctaccctacgccggacgagaagcgccgcctggccacgctcaccggcctctcg
ctcacgcaggtcagcaactggttcaagaaccggcgacagcgcgatcggaccgggggcggc
ggcggcgcgccttgcaagagcgagtctgacgggaaccccaccacggaggacgagtccagc
cgcagccccgaggacctggacaggggggtggctccggtggctgcggaggcccccgcccag
ggctctctattcctggccggggccgccccgcccgcgccctgccccgcctcctcgtccatc
ctggtgaacgggagcttcctggcggcgggcagcccccccgccgtgctcctcaacgggagt
cccgtcatcatcaacagcctggccctcggggaggcctccagcctgggccccctgctgctg
gcgggcggcagtggcgcccctccgacgcagcccggtgccccgggggccggggagggcaag
acctccctggtcctggacccgcagaccggggaggttcgactagaggaggctccgcccgag
gcctccgagaccaaggaggcccaggtggccgcttccgggacgcctgcagaggaggccgcc
gggccgctgccccaagtggtgcctgggcccccaccggctgccaccttccccctgcccccg
ggaccggtgccttctgtggccgctccccaagtggtgccgctctctcccccgccggggtac
ccggcaggcctgggccccgcctccccgctgttgaacctgccccaggtggtgcccacctct
caggtggtgaccctgccccaggctgtggggccgctgcagctgttagccgccggcccgggc
agccctgtgaaggtggcggccgccgcgggccctgccaatgtgcacctgataaactccggg
gtgggcgtgacggccctgcagcttccttccgccgctgcgccaggaaactttctcctggcc
aacccggtgtccggcagcccaatcgtgacgggcgtggccgtccagcagggcaagatcatc
ctcaccgccaccttccccacgagcatgctggtctcccaggtcctgccgcctgcccccagc
ctggccctgcccctgaagccagacgcggccatctcggtgcccgaaggagccctccctgtg
gcccccagccccgctctccccgacgtccacgcccttggcccgctttccgcacagcagccg
ccgcagccaccgcctggccccgccactgccgccgcagccaccagcctgcccttcgcggat
tcctcggctctcctcccgggcttcccggcaccgccgcccgaagggctcatgctgtcgccc
gcggccatgcccatctggccagcagggctggaactgagcggcggcacagaagggctgctg
gaagcagagaaggggctggggacgcaggccccccacaccgtgctgaggctgccggacccc
gaccccgaggggctgctcctggggtctgcggcagggggcgaggcggacgaggggctggag
gccgagccgaaggttctgacgcagctccagtcggtgcctgtggaagattccctggaactg
tga
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