Vulpes lagopus (Arctic fox): 121488777
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Entry
121488777 CDS
T07435
Symbol
PKD1L1
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
vlg
Vulpes lagopus (Arctic fox)
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vlg03037
]
121488777 (PKD1L1)
04040 Ion channels [BR:
vlg04040
]
121488777 (PKD1L1)
Cilium and associated proteins [BR:
vlg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121488777 (PKD1L1)
Ion channels [BR:
vlg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121488777 (PKD1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
REJ
PKD
PLAT
PKD_4
Polycystin_dom
ApoO
Motif
Other DBs
NCBI-GeneID:
121488777
NCBI-ProteinID:
XP_041607017
LinkDB
All DBs
Position
4:complement(59488085..59580957)
Genome browser
AA seq
2740 aa
AA seq
DB search
MGAICGGPGWRVLVQALPLLCLLQPLPGGTWNEELHANPVPFTSPAKVSHPPGALTFGEE
AQVLENPPPLASWDQDIVKATSRAPLSATSRRSQAAPDPGDHADRDSWGPSITITSFWNS
SGPDPCRPRKCAVGPGSSVPCGLLQRSCPPAGPCRLRVRIPSCPSADDVASDVLPGTDVA
STATSPGVPVRPAVSAPTSSPTAHPPTLPRSSLGHGGSASWPRPPTRCHPGAVSMHSPPD
ALDAADHGFPDTDARAPLSLGFRVWASPKAALCLRVDFGDSSGVQVTIYNVSRGIAVTAY
HQFRKEGVYVLKALIYNDLCGPGRELGPYYVEMGPATVSVFMNSSSIRRDELLVFAGSHA
DQKSTVVTHHFAAGPPCNVSFTCQSCAAGGQAWPSVTVQYRMQPISVYTNGTVFATDVDI
TFLAVTEETTPLEFVWSFGEGPALRTTSRSIKRRLSIPQWYSVTVQAASGLGRVASEPRR
VRTQRRIVANRLVSPPSALLNASVTFTCRLNFGTNVAFLWDFGDGTMGPGGSSAHHIYQR
EGQFTVQVRAFNDVSAVSLAKQLFVVREPCQPPPVKNMGPGKVQVWRSQPVTLGVTFESA
ILCDISQGLSYTWTIRTSEGWPVPLPPGVSTRRQTITVPSYFLELGNYTALARVQVDGSV
VHSNYSVGVEVRARAPVSVISEGTHLFISRAPSVTVVLSGSQSYDPDNPRATLRYHWTCT
AAGAPGEPCFTASSPHSLRAGAPSLSFPASSLSNSYDQFLVTLTVSSAGRNSSEAQVFLS
PRPDAALRFVRISRGSFKDALVNWNEELSLRAECDACAAGPRLSYSWDLFLVNATEGTRR
DGPFCRAVGLLGAAGLGADSTLPPSSAPSTAPSCPEPCGTGVASSRKQSPQPWVQPGPSP
PGTPSSGPVGTHPLPAAGNAAFPGLARQDAGSPGTWSPRSLSPSPSDFEADYGDIQEAVP
PTGRQPAHWSGASLLGADPSLSPGGGQGDGDNLLGPLRPAAGPALMVDWPKAPVGRALFR
SYTASGITGHAVTIKPFSLSPGETYVVQASVASTRGLLGRAQLYVTLHPAPRDVACQVQP
HRGLEAHTVFSVFCMAVRPDFRYKFSYRIGNASEHTLYHGRDTQYYFVLPAGEPSDNYKV
MVSTEIMDGVGSRTLPCAVAVTVLPHFHGSLCLDEDTYNSSLKHLSTLQLMGSYTEIRNY
ITTITRVLSRWAVEDRSPSCGQWSRIQDALISSTCGLPVADQEDMTHSVLMLRGLLRFPR
KLSFRSAALILKSARAPLAQSPLSGRLAVDKGLMLELILLISEVLEASDWEKPRNSGFLQ
EEGTKIISDLLLDGLSASMEHQLHVSAGQMEFRTRLHHDLQSSVQSLGSVQVHLPADLAA
QSPVGAVQGPCYISQLMLFKKNLYPWGRGPGQIGQVVSASLFGCSSRRPCRRXWRLRAPV
AVEFGEEGGLDNGRTRTAFVLLRDRVNVHEFTGAATPRESLHIRIEFFRPPSGAFPVMVL
VRFSEKPTPSAFLVKKVYVWDEQPVHLHIPAGPLRDLSLGYLSLLDADYDRSPRNRYSAQ
AVNYTVRFHWLQCVAWEAGEWRPASSSPQPGASPGKVNCSHDRLVPVSISRRSPNATFSV
SDISELQRHPENLLPGVLIVVFTILYALLVTKSRRADCHERKKAGYVFLHEDAPPGHQLY
AVVVDTGFRSPTRCSAKVYIVLCGEHGLSGPRELYCPEQPLFERNSRHTFVLSVPALLGP
LRRICLWHDSRGPTPAWYVSHVMVKELAAGPGHSWLFPAECWLSASGRDGHTAWELRSLR
RGLGFWKLLYCKFTEYLEDFHVWVSVYSRPSPSGFPPTARLTVAFALLCAYACLTALVTA
AGQEQLVWALSAPDAAAAGSLWTGLLGTLLASPGAQLLSLLFRLSQDPGGPSRVNACRSR
SPLVGAAPGPNPRGGTAEAGKTSEGGLVSGSSGACRRAAGGDGAGCPPPEREDLGADAAQ
RAPREKGTRGAQGPGPPASRAPGRRGAPQWELKPRRPDARTTREAGAAEAAEAAEAVVPG
PRAFPRALTWQPAAGGGVAALRWPRALLPWSGSAAWVLCGMVSVACGLGTAFLGYRFDPT
QCVRWLYLLAASVLCCVLVTQPLLVSLLALGFAWRRRHDPHFFTEALHAATKDLGPELEA
RARPHPPHRVSQTEEVLAARQRARHLRRARPPSAAQLSAVRQKLQRQTRTRWALRDMCMF
TLLLLLHLLILCGTGSRDAHSLHHAIRTEFTRGASSASGGLGSVADWWGWTLTTLLDGLH
GGGAPPADPPGAQPRALGGKCYLLGSLVIRQLRRPSGSAGQLPSRAPVLPEDLPPEVGGP
DGAPVTEPATPGDSRGCRAREPWELSLGSTRPAAHAALSGLRAGGWIDGSTSAVSVHFVL
YNCPTRLLSSVALHAELLPAGGLALAPLVESVVAFHSDSALWHRLALPELAFLVLSLTQS
CLQLHRAAQEGVRSYWGEPGSWLELAIAGAGLARYAASCHLATVAGAVTDRLHRGHFRGS
MDLSFAASWNQRVTWLQGTLSFLLTLKCIHLFSVQGTTASCSFLMRRSLAGAFAAALAGV
LALAAHSHLRAVPPGTLTDFSRSPRSRLSRSDLQAPAWCCGALFMVMSTAWLGMLRGSFT
TLARKRKSFQSQSVVRLADVTAYVRTEALAWLGLERPQQEETEMVESHNYYLDDVSDLLD
ELLSKIHALSDSLQLPLPKQQFCDMQEARAKGHSSAGISA
NT seq
8223 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccatctgcggggggccgggctggagggtgctcgtgcaagcactgcctctgctg
tgcctgctgcagccgcttcctgggggcacctggaacgaagagctccacgctaatcctgtg
ccttttacgagccccgcgaaggtgagccatcctccaggtgcattgacatttggggaagaa
gcccaggttctggagaacccgcccccgctggcgtcctgggaccaggacattgtgaaagcc
accagcagagcaccgttaagtgccaccagcaggaggtcgcaggccgctccggacccgggt
gaccacgccgacagagactcctggggaccttccatcacaatcacgagcttctggaacagc
agtggcccggacccctgtcgcccacggaaatgtgcggtcgggccagggagcagtgtgccc
tgtggccttctccagcgcagctgtcccccagcagggccctgccgcctgagggtgaggatc
ccctcctgcccgtctgcagacgatgtggcctcagacgtgcttccagggactgacgtcgcc
tcgaccgctacgtccccgggggtccccgtgaggccggctgtgtccgccccgaccagctct
ccgactgcacatcctcccaccttgcccagaagctcccttggccacggtggctcagcgtcc
tggcctcgtccccccactcgctgtcaccccggagccgtgtccatgcacagtcctcccgac
gcgctggatgccgccgaccatggcttccccgacacggacgctcgggcccctctgagtctg
ggcttccgggtctgggcatctcccaaggcagctctgtgtctgcgggtggatttcggggac
agctccggggtccaggtgacgatctacaatgtgtcccggggaatcgcagtcaccgcctac
caccagttcaggaaagaaggagtctatgtgctcaaggcacttatttacaacgacctttgt
ggacccggaagggagctcgggccttattacgtggagatgggccccgcgaccgtgtcggtg
ttcatgaattctagcagcatccgcagggatgagcttctggtctttgctggctcccacgcg
gatcagaaaagcactgttgtcacacatcactttgcagccggtcccccgtgtaacgtgtcc
ttcacatgtcagagctgtgcggccggcggccaggcttggcccagcgtgactgtccagtat
cggatgcaacccatctctgtctacacaaacggaaccgtgtttgccactgacgtcgacatc
actttcctggctgtcacggaggaaacaacccccttggagttcgtgtggtcctttggagaa
ggtccagccctgaggacaacatccaggagcattaagagaagactcagcatcccccagtgg
tacagcgtgacagtgcaggcggccagcgggctgggcagggtggcctcggagccccgccgc
gtcaggacgcagaggagaatcgtcgccaaccggctggtgtctcccccctcagctctgctg
aatgccagcgtcaccttcacatgcagactcaactttggcaccaacgtggctttcctgtgg
gactttggggacggcaccatgggcccggggggcagctctgcccatcacatctaccaaagg
gaaggacaattcaccgtccaggtccgagccttcaacgacgtcagtgctgtctccctggca
aagcagctgttcgtcgtgcgggagccgtgccagccgccccccgtgaagaacatggggccg
gggaaggtgcaggtgtggaggtctcagcctgtgactctgggcgtcacattcgagtctgcg
atcctctgtgacatctcccaaggcctctcctacacctggaccatccggacctccgagggg
tggccagtgcccctgccccctggcgtcagcacacgcaggcagaccatcactgtccccagc
tacttcctggagcttgggaactacaccgctctcgccagggttcaggtggatggcagcgtc
gtgcacagcaactacagcgtcggggtggaggtgcgggccagggcccccgtcagcgtcatc
tccgagggcacgcacctgttcatctccagggccccctcagtcaccgtcgtcctcagcggc
tcccagtcctatgacccagacaaccccagggccaccctcaggtaccactggacgtgcact
gcggccggcgcccccggggagccctgcttcaccgcctcctctccgcacagcctgcgtgcc
ggggccccctccctttcttttcccgccagctctctcagcaacagctatgaccagtttctc
gtgacgctgaccgtgtccagcgccggccggaactcttcagaggcgcaggtgttcctgtcc
ccgcgccccgatgcggcactcaggtttgtccgcatctcccggggcagcttcaaggacgcg
cttgtcaactggaacgaagagctttccctgcgcgccgagtgcgacgcgtgtgccgcgggg
ccccgcctgtcttactcctgggacctgttcctggtcaacgccacggaagggacccgaagg
gacggtcccttttgcagggcggtggggctgctgggtgctgccggcctgggggccgattcc
acgctgccgccatccagcgcaccgtccacggcgccgagctgcccggagccctgcgggacg
ggtgtggcgtcctcgcggaagcagtcaccacagccctgggtgcagccgggaccatcaccc
ccggggacaccatcctcggggcccgtcggcacgcacccgcttcctgctgcgggcaacgcc
gcgttccctggactggctcgccaggacgcggggtcccctgggacttggtcgccccggagc
ctgtcgccgtccccctctgacttcgaagccgactacggggacatccaggaggcggtgccg
cccacagggagacagccagcccactggtccggcgccagcctcctgggagcagacccgagt
ttgagtcctggtgggggccagggggatggggataacctgctgggccccctgcgccctgcg
gccgggccggccctcatggtggactggcccaaggccccggtgggccgcgccctcttccgc
agctacacggcctctggcatcacgggacacgcagtgacaataaagccattctcgctgagc
cccggggagacatacgtcgtgcaagcctccgtggcctccacgcgcggcctgctggggagg
gcgcagctgtacgtgaccctgcatccagccccgcgggatgtggcctgccaggtgcagccg
caccgcggcctcgaagctcacaccgtcttcagcgtcttctgcatggcggtgagaccggac
tttcgttacaaatttagttaccggataggaaatgcctctgaacacactttgtaccatggg
agagacacccagtattacttcgtgctgccggcgggcgagccctcggacaattacaaagtc
atggtgtccacggagatcatggacggcgtgggctcccggacgctcccatgcgcggtggca
gtgaccgtgctgccccatttccacgggagcctctgcctggacgaggacacttataactcc
agcctgaagcacctgtccactcttcagctgatgggcagttacaccgagatcaggaactat
atcaccacgatcaccagggtcctgagtcgctgggccgtggaggaccgaagtccctcgtgt
ggccagtggtcgcggatacaggatgcgcttatttcttccacgtgcggactgcctgtggca
gatcaggaagacatgacccactccgtcctcatgctgaggggcctcctacgcttccctcgt
aagctgagcttcaggagcgcggctctcatcctgaagtctgcccgggcacccctcgctcag
agcccgctgtcggggaggctggcagtggacaaggggctgatgcttgagctcatcctactc
atatccgaagtcttggaggcctcggactgggagaaacccaggaattcgggcttcctgcaa
gaagaggggaccaagatcatctcggatctcttgttggacggcctctctgcaagcatggag
caccagctccatgtcagcgctgggcagatggagttccgcacgcgtcttcaccacgacctg
cagagctccgtgcagagcctgggctctgtccaggtgcacctgcctgcagacctggctgcg
cagagtcctgtgggggccgtgcagggcccgtgctacattagccagctcatgctcttcaag
aagaacctgtatccgtggggacgaggtcctgggcagattggccaggtggtctccgcatcc
ctgttcggctgctccagcaggaggccctgtcggcggnnctggcggctgagggcacccgtg
gccgtggagttcggggaggaaggcggcctggacaacggaagaaccaggacagcgtttgtg
ctgcttcgggacagagtgaacgttcatgagttcacgggcgctgcgaccccccgggagtcc
ctgcacataaggatcgagttttttaggcccccgtcaggagctttcccggtcatggtgctg
gtgaggttctccgagaaacccactccttctgcttttcttgtgaaaaaggtctatgtctgg
gatgagcagcccgtgcacctgcatatacctgctgggcctctgagagacctcagcttgggc
tatttatccttattggatgctgactatgacagaagccctcggaacagatactcagcccag
gccgtgaactacactgtgcgcttccactggctgcagtgcgtcgcctgggaagccggagag
tggaggccggcgagctcctccccacagccaggagcgtctccaggaaaagtgaactgcagc
catgaccgcctggtgcccgtgtccatctcaagaagaagcccgaacgccactttctcagtg
agtgacatttccgagctgcagagacacccggagaacctgctccccggtgttttgatcgta
gtttttacaattctttatgcgcttctggttactaaaagcagacgggcagattgccatgag
agaaagaaagccggttacgtttttctgcacgaagatgctccacccggccaccagctgtac
gcggttgtcgtggacacaggcttccgctctcccacccgctgtagcgccaaggtttacatc
gtcttatgtggggagcacgggctttcaggaccccgggagctctactgtccggagcagccc
ctgtttgaaaggaattccaggcacacctttgtcctgagcgtccccgctctgctgggcccg
ctgcggaggatctgcctctggcacgacagccgtgggcccaccccggcctggtacgtgagc
cacgtcatggtgaaggagctggcggccgggcccgggcacagctggctcttccccgccgag
tgctggctgtcggcaagcgggcgggacggccacacggcgtgggagctgcgcagcctgcgc
cggggcctcggcttctggaagctcttgtactgcaagttcacggagtatctggaggatttc
cacgtgtgggtctccgtgtacagccggccctcccccagcggcttcccgcccacagcgcgc
ctcaccgtggcctttgccctgctgtgcgcctacgcgtgtctcactgccctggtcacggcg
gcaggacaggagcagctggtgtgggccctcagtgcccccgatgctgcggccgccgggtcc
ctgtggacgggcctcctgggcaccctgctggcttctcccggggcacagctcttgtcgctg
ctcttcaggctcagccaggaccccggtggaccttcccgcgtgaatgcctgccggtcccgc
tccccactcgtgggggcagctccgggccccaacccccgtggaggaacggcagaggcaggg
aagacgagcgagggcggccttgtctccgggagcagcggggcctgcaggagggcggccggg
ggggacggtgcagggtgtccgcccccggagcgggaggacctgggagctgacgccgcccag
cgcgctccgagggagaaggggacccgcggggctcaagggccgggccctcctgcatccagg
gctcccgggagacgcggggccccgcagtgggagctgaagccgaggaggccggacgctcgg
accacgcgtgaagcaggcgccgccgaagcagccgaggcagccgaggctgtggttcccggg
ccccgggcgttcccgcgggcgctcacgtggcagccagcagcgggtggaggagtcgctgcg
ctccgctggccgcgggccctgctgccttggtcgggctccgcggcatgggtcctctgcgga
atggtgtccgtggcctgtggcctagggacggcgtttctaggatacaggttcgacccgacg
cagtgtgtgcgctggctgtacctgctggccgcctctgtgctgtgctgtgtgctggtcacg
cagccgctgctggtgagcctcctggccttgggctttgcctggaggaggagacacgacccg
cacttcttcactgaggctctgcacgcggccaccaaggacctgggccctgaactggaagcg
cgtgcgaggccccacccgccccaccgtgtgagccagacggaggaggtgttggcggcccgg
cagcgagcgcgccacctgcgccgggcacggccaccgtccgctgcccagctcagcgccgtc
agacagaagctacagcgacagacccggacgcggtgggcgctgagagacatgtgcatgttc
accctcctgctgcttctgcatttgcttatcctctgcgggacgggctcccgggatgcgcat
tccctgcatcacgccatccggaccgagtttacaaggggtgccagcagcgcctcgggcggc
ctgggaagtgtggcggactggtggggctggactctgaccacgctgctggacggcctgcat
ggaggcggcgctcccccggccgacccgccgggcgctcagccccgggcccttggcggcaag
tgctacctgctgggctccctggtaatcagacagctgcggcggccctccggaagcgcgggc
cagctgcccagccgggccccggtgctccctgaagaccttccccccgaagttggcggcccc
gacggcgccccggtgaccgagcctgcgacccctggggattccagaggctgcagggccagg
gagccatgggagctcagcctgggcagcacaaggccggcagcccacgcagcgctgagcggc
ctcagggccggtgggtggatcgacggcagcaccagtgccgtgtccgtgcacttcgtcctc
tacaactgtcccacgcggctgctgtccagtgtggccctgcacgctgagctgctccccgcg
ggcggcctggccctcgccccgctggtggagtcggtggtggccttccacagtgactcggcc
ctgtggcaccgcctcgcgcttcccgagttggccttcctggtgctcagcctgacccagtcg
tgcctgcagctgcaccgcgcggcccaggagggcgtccgcagctactggggcgaacccggg
agctggctggagctcgccatcgctggggctggtctcgcccgctatgctgcctcctgccac
ctggccaccgtggcgggcgcagtgaccgaccgcctccacagaggacacttccgagggtcc
atggacctcagcttcgcggcatcatggaaccagagggtgacatggctgcaggggaccctc
tccttcctcctgaccctgaagtgcatccaccttttcagcgtccagggcaccacggcgtcc
tgctccttcctgatgcggcgctcgctcgctggcgccttcgcggcagcgctggcaggcgtc
ctggcactggccgcgcacagccacttgcgtgcggtgccaccgggcaccctcacagacttt
tcccgaagcccgcggtcccgtctttccaggtctgacctgcaggccccagcctggtgctgc
ggggccctcttcatggtgatgagcaccgcatggttgggaatgctgagaggttccttcacg
actcttgctcgaaaaaggaaatcttttcaaagccaatctgttgtgagactggcagacgtg
actgcctatgtgcggacagaggccctggcctggctgggactggaaaggccacagcaggaa
gagaccgagatggttgagagtcataattactacctggatgacgtttctgatctgctggat
gaacttctgtcaaagattcatgctttgtctgacagcctacagcttcctcttccaaagcag
caattctgtgatatgcaagaggccagggcaaaaggtcattcctcagcaggtatttctgcc
taa
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