Vulpes lagopus (Arctic fox): 121499738
Help
Entry
121499738 CDS
T07435
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04140
Autophagy - animal
vlg04148
Efferocytosis
vlg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121499738 (VPS11)
04148 Efferocytosis
121499738 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121499738 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vlg04131
]
121499738 (VPS11)
Membrane trafficking [BR:
vlg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121499738 (VPS11)
Hops complex
121499738 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
TPR_11
DLP_helical
zf-RING_11
zf-HC5HC2H
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
DUF5847
Motif
Other DBs
NCBI-GeneID:
121499738
NCBI-ProteinID:
XP_041626723
LinkDB
All DBs
Position
10:complement(41020621..41030034)
Genome browser
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGSDGAAPAAAPASGPAASKFLCLPPGITVCDSGRGSLV
FGDMEGQIWFLPRSLQPTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFPAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKTQ
ILHKGNYPVTGLAFRQAGKITHLFVVTTENVQSYIVSGKDYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSEFTS
RDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKILMHHIPEQTTQLLKGLCTDYQPSLEGRGDREAPGCRANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKDPQVKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVIAVCERHGEQEPSLW
EQALSYFARKEEDCKEYVAAVLKHIESKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETTRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLNASLEAGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgcttcgttttcttcgacaaggaactggtgaaggag
cccctaggcagtgatggggctgctcccgcagctgcacctgcctcaggacccgctgcctcc
aagttcctttgcctccctcccggcatcactgtctgcgactcaggccgagggagcctcgtc
tttggagatatggaaggccaaatctggttcttgcctcgctccctacagcctacaggcttc
caagcctacaaactccgggtgacacacctgtaccaactgaagcagcacaatattttggca
tctgttggtgaagatgaagaaggcatcaaccccctggtaaagatctggaacctggagaag
agagatggtggcaatccactctgcacccgaatcttccctgccatcccaggaacagagccg
actgttgtgtcttgtttgactgtccacgaaaatctcaactttatggccatcggtttcaca
gatggcagtgttacattgaacaaaggagacatcacccgggaccggcatagcaagacccag
attctgcacaagggcaactatcctgtaactggactggcctttcgccaagcaggaaagatc
actcatttgtttgttgtgacaactgagaatgttcagtcctatatagtttctggaaaggac
taccctcgtgtggagttggacacccatggttgtggactgcgctgctcagccctaagtgac
ccttcacaagacctgcagttcatagtggcaggagatgaatgtgtctacttgtaccaacct
gatgaacgtgggccctgctttgcgtttgagggccataagctcatcgctcactggtttaga
ggctaccttgtcattgtctcccgtgaccggaaggtttctcccaagtcagagtttaccagt
agggactcacagagctccgacaagcagattctcaacatctacgacctgtgcaacaagttt
atagcctatagtgccgtctttgaggatgtagtggatgtgcttgctgagtggggctccctg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaaa
ctggagatgctgtttaagaagaacctatttgagatggccattaacctggccaagagccag
cacctggacagtgatgggttggcccagatcttcatgcagtatggggaccatctctacagc
aagggcaaccacgatggggctgttcagcagtatatacgaaccattggaaagttggagcca
tcctatgtgatccgcaagtttctggatgcccagcgcattcataacctgactgcctaccta
cagaccctccaccggcagtccctggccaatgctgaccataccacgctgctgctcaactgc
tacaccaagctcaaggacagctcaaagctagaggagttcatcaagacaaagagtgagagt
gaagtccactttgatgtggagacagccatcaaggttctccggcaggctggctactactcc
catgccctctacttggctgagaaccatgcacatcatgagtggtacttaaagatccagcta
gaggacatcaagaattatcaggaagccctacggtacatcggcaagctgccttttgagcag
gcagagagcaacatgaaacgctatggcaagatcctcatgcaccatataccagagcagacg
acccagttgctgaagggactctgtacagactatcagcctagccttgaaggccgaggcgat
agagaggctcctggatgcagggccaactcagaggagttcatccccatcttcgccaacaac
cctcgagagttgaaagccttcctggaacacatgagtgaagtacagcctgactcaccgcag
ggcatctatgatacgctcctggagctacggctgcagaactgggcccatgagaaagatcca
caggtcaaagagaaacttcatgcagaggccatctccctgctgaagagcggccgcttttgt
gacgtctttgacaaggctctggtcctctgccagatgcatgactttcaggatggggtcctt
tacctctatgaacaggggaagctgttccagcagatcatgcactaccacatgcagcatgag
cagtaccggcaggtgatcgctgtgtgtgagcgccatggggagcaggagccctccctatgg
gaacaggcgctcagctactttgcccggaaggaggaggactgcaaggagtatgtggcagca
gtgcttaagcacattgagagcaagaacctcatgccaccccttctggtggtgcagacgctg
gcccacaactcaacagctaccctgtctgtcatccgggattacctggtccaaaaactgcag
aaacagagccagcagatcgcacaggatgagctccgggtgcgacggtaccgagaggagacc
acccgcatccgccaggagatccaggagctcaaggcgagtccaaagattttccagaagacc
aagtgcagcatctgtaacagtgccttggagttgccctcagttcacttcctctgcggccac
tccttccaccaacactgctttgagagttactcagaaagtgatgccgattgccccacctgc
ctccctgaaaaccggaaggtcatggatatgattcgggcccaggaacagaaacgcgatctc
cacgatcagttccagcaccagctcaagtgctcgaatgatagcttctctgtgattgcggac
tactttggccgaggtgttttcaacaaattgactctgctgaccgaccctcccacggccagg
ctgaacgcaagcctggaggctgggctgcaacgggacttgctcatgcactccaggaggggc
acttaa
DBGET
integrated database retrieval system
