Micromonospora maris: VAB18032_27886
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Entry
VAB18032_27886 CDS
T01471
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
vma
Micromonospora maris
Pathway
vma03030
DNA replication
vma03430
Mismatch repair
vma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VAB18032_27886
03430 Mismatch repair
VAB18032_27886
03440 Homologous recombination
VAB18032_27886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vma03032
]
VAB18032_27886
03400 DNA repair and recombination proteins [BR:
vma03400
]
VAB18032_27886
Enzymes [BR:
vma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VAB18032_27886
DNA replication proteins [BR:
vma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VAB18032_27886
DNA repair and recombination proteins [BR:
vma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VAB18032_27886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
DNA_pol3_beta_2
MerR
DNA_pol3_beta_3
DNA_pol3_beta
MerR-DNA-bind
DUF6285
Motif
Other DBs
NCBI-ProteinID:
AEB46650
UniProt:
F4F404
LinkDB
All DBs
Position
5192691..5193881
Genome browser
AA seq
396 aa
AA seq
DB search
MDSDLRSIGELARASGLTVSALRFYDAAGVLVPAWVDPVTGYRRYTDDQVAPARLVAGLR
RVGMPVAEIAQAVRAEPALVHRLLDTHLRRLEQGLADARREVSRLRSLLPADQPGITRLT
LTGAALAAAVDAVRFAVGTDPTVPALTGVLFDVTDSGLELVATDRHRLAVATAEATVHGP
AVRTLLPLDTVDALRHLLDASAGAGAGAGAGADRAVVELTVSGSSLVADVAGHELRATAL
PYDFPDYHALLPRSGAAGPTRRVPVDAEWLVTALRAGGPTVVREYAGRSWPVTVLGLGPP
DRLRLLGPDDLPGPDDLRDPDDLPDPDRPGLAAGADRAGADGTELRVGVNGEYLLDALDA
AGGRHLTLELDSPLTPLTIRRPDDEGAFSILMPIRL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
gtggacagtgacctgcgcagcatcggtgagctggcccgggccagcgggctcacggtgagc
gctctgcggttctacgacgccgccggggtgctggtgcccgcctgggtcgacccggtcacc
ggttaccgccgctacaccgacgaccaggtggcaccggcgcggctggtggccgggctacgc
cgcgtcggcatgccggtggccgagatcgcccaggcggtacgcgccgaaccggcgctggtg
caccggctgctcgacacgcacctgcggcggctggagcaggggctggccgacgcgcgtcgc
gaggtgtcccggctgcggtcgctgctgccggccgaccagcccgggatcacccgactcacc
ctgaccggtgccgcgctcgccgccgccgtggacgccgtacggttcgccgtcggcaccgac
ccgacggtgccggcgttgaccggtgtgctgttcgacgtgaccgactcgggcctggaactg
gtggcgaccgaccggcaccggctggcggtggcgacggccgaggcgacggtgcacggcccg
gcggtgcgcaccctgctgccgctggacacggtcgacgccctgcgccacctgctcgacgca
tccgcaggcgctggcgctggcgctggcgctggcgctgatcgggctgtggtcgagttgacc
gtgtccggctcgtcgctggtcgccgacgtggccgggcacgaactgcgggccaccgcgctg
ccgtacgacttcccggactaccacgcgctgctgccacgctccggtgccgccgggccgacc
cgacgggtaccggtcgacgcggagtggctggtcaccgcgttgcgggccggtgggcccacg
gtcgtacgggagtacgccggccggtcgtggccggtgacggtgctcggtctcggcccgccg
gaccggctccgcctgctcggccccgacgacctgcccggccccgacgacctgcgcgatccc
gacgacctgcccgatccggatcgtcccggcctggccgccggtgctgaccgggccggcgcg
gacggcaccgagttgcgggtcggagtcaacggcgagtacctgctcgacgcgctggacgcg
gcgggcggccggcatctgacgctggaactggacagcccgctcacgccgttgaccatccgc
cgcccggacgacgagggcgccttctccatcctgatgccgatccgactctga
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