Vibrio mimicus: AL543_06040
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Entry
AL543_06040 CDS
T04381
Name
(GenBank) hemagglutinin
KO
K08604
vibriolysin [EC:
3.4.24.25
]
Organism
vmi
Vibrio mimicus
Pathway
vmi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL543_06040
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vmi01002
]
AL543_06040
Enzymes [BR:
vmi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.25 vibriolysin
AL543_06040
Peptidases and inhibitors [BR:
vmi01002
]
Metallo peptidases
Family M4: thermolysin family
AL543_06040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M4
Peptidase_M4_C
PPC
FTP
PepSY
Nterm_IS4
Motif
Other DBs
NCBI-ProteinID:
AMG02553
LinkDB
All DBs
Position
1:complement(1342418..1344253)
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AA seq
611 aa
AA seq
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MKQIQRPLNWLILAGAATGFPLYAAQMVTIDDVSIVEQALAQQQYSVVPAASGFKAVNTV
QLPNGKVKVRYQQLYNGVPVYGTVVVATESKKGISQVYGQMAQQLEADLSTVAPDIESKQ
AIALAVSHFGQQHAIDAGQTLPIENENAQLLVRLDENQQAQLVYLVDFFVASETPARPFY
FINAATGEVLEQWDGINHAVATGTGPGGNQKTGRYEYGSNGLPGFSIDKTGTTCTMNNSA
VKTVNLNGGTTGSTAFNYACNDSTNYNSVKTVNGAYSPLNDAHYFGKVVFDMYQQWLNTS
PLTFQLTMRVHYGSNYENAFWDGRAMTFGDGNTRFYPLVDINVSAHEVSHGFTEQNSGLV
YKDMSGGINEAYSDIAGEAAEFFMRGSVDWVVGSDIFKSAGGLRYFDQPSRDGRSIDHAS
QYYSGMDVHHSSGVFNRAYYLLANKAGWNVRKGFEVFAVANQLYWTPNSTFAQGACGVVK
AAQDLSYNTADVVAAFNTVGVNAACGTTPPNNNVLEKGKPITGLTGSSNGEDFYTFTVAA
SGSVVVSTSGGTGDVDLYVKAGSKPTTTSWDCRPYRPGNAEQCTISALADTTYHVMLRGY
SNYSGVTLSLN
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagatacaacgtcctctgaattggctaattctggccggtgcggctaccggtttc
cctctttacgcagcgcaaatggtgacaattgatgatgtatcgattgtcgaacaagcgctt
gcacaacaacaatacagtgtggtgcctgcggccagtggttttaaagccgtgaatacggtt
caacttcccaatggcaaagtgaaagtgcgctatcagcagctttacaatggcgtgccggtg
tacggcactgtcgtggtggcgacagaatcgaaaaaaggcatttctcaggtgtacggccaa
atggcacaacagttggaagccgatctttctactgtcgctcctgatattgaaagcaaacaa
gccattgctttggcggtgagtcattttggtcagcagcatgcgattgatgcaggccaaaca
ttgccgattgaaaatgaaaatgcacagctgttggtacgtttggatgaaaaccaacaagca
caactggtgtacttggttgatttctttgttgcttcagaaacgccagcacgcccgttctac
tttattaatgcggcaacgggagaagtgctggagcagtgggatggtatcaaccatgccgtt
gcaacgggaacggggcctggcggtaaccaaaaaacaggccgttatgaatatggcagtaat
ggtttacccggtttcagtattgataaaacgggcaccacctgcaccatgaataacagtgca
gtaaaaacagtgaacctcaatggggggaccacaggttcaacggctttcaactatgcctgt
aacgacagcaccaattacaacagtgtgaaaaccgtgaacggggcttattcaccgcttaat
gatgcccactactttggtaaagtcgtgttcgacatgtaccagcagtggctgaatacttcc
ccattgaccttccaactgaccatgcgtgtgcactacggtagtaactatgagaacgcgttc
tgggatggaagggcaatgacgtttggtgacggtaatacccgtttttatcctttagtggat
attaacgtcagtgcgcacgaagtgagccacggttttactgagcaaaactctggccttgtc
tataaagatatgtcgggtggtattaacgaagcttactcagatattgctggtgaagccgct
gaattctttatgcgtggcagtgtcgactgggtcgtgggttccgatatctttaaatcggcg
ggcggattgcgttattttgatcaaccatcgcgtgacggacgttcgatagatcatgcttct
cagtattacagcggtatggatgttcaccattctagtggtgtctttaaccgtgcatattac
ttactcgccaataaagcgggttggaacgtacgcaaaggctttgaagtgtttgccgttgct
aaccagttgtactggacgccaaacagcacgtttgctcaaggggcatgtggagtggtgaaa
gcggctcaggatctcagctataacacggctgatgttgtggcagcgtttaacacagtcggt
gtgaacgccgcttgtggaacaacgccacccaacaataatgtcttggaaaaaggtaagccg
ataacaggactgacaggctcaagcaatggtgaagacttctatacattcacggtagcggcg
tcaggtagtgtcgtcgtatccaccagcggtggtacgggcgatgtggatctgtatgttaaa
gcgggtagcaaaccgacaaccacgtcttgggattgccgaccataccgcccaggcaatgcg
gaacaatgtaccatttcagcattagcggacacgacttaccatgtaatgttgcgtggttac
agtaactactctggtgtcacattaagtctcaactag
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