Vibrio natriegens: PN96_08175
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Entry
PN96_08175 CDS
T04636
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vna
Vibrio natriegens
Pathway
vna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PN96_08175 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vna03400
]
PN96_08175 (ruvB)
Enzymes [BR:
vna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PN96_08175 (ruvB)
DNA repair and recombination proteins [BR:
vna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PN96_08175 (ruvB)
RecFOR pathway proteins
PN96_08175 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
nSTAND3
AAA_22
AAA_16
AAA_14
AAA_3
Rad17
NTPase_1
AAA_18
RNA_helicase
Bac_DnaA
AAA_2
DUF815
NB-ARC
Sigma54_activ_2
AAA_24
TIP49
AAA_17
ABC_tran
TniB
AAA_19
bpMoxR
AAA_28
AAA_PrkA
ATP-synt_ab
TsaE
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ALR15963
LinkDB
All DBs
Position
1:complement(1782970..1783974)
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AA seq
334 aa
AA seq
DB search
MIEADRLIAPENPAFKEEDVIDRAIRPKKLEDYQGQDHVRGQMEIFIKAAQLRNEALDHL
LIFGPPGLGKTTLANIVANEMEVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIT
QRLEFYKIKDLQDIVQRSADCLGLSMDPEGALEVARRARGTPRIANRLLRRVRDYAEVKG
NGHICADVADKALNMLDVDAQGFDYMDRKLLLAIMEKFGGGPVGLDNMAAAIGEEKDTIE
DVLEPYLIQQGYLQRTPRGRIATDRAYLHFGIEK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagctgatcgtttaatcgctccagaaaacccggcgtttaaggaagaagacgtc
attgaccgtgcaatccgtccgaaaaagttagaagactaccaaggtcaggatcacgttcga
ggccagatggagatctttattaaagcggcacagctgcgtaatgaagcgttagatcacctg
ctgatttttggtcctcctggcttgggtaaaaccacactcgccaatatcgttgctaacgaa
atggaagtgaacattcgtaccacttcaggtcctgtgctggaaaaagcaggggacttagcc
gcgctgctcaccaacttagaagaaaacgatgttctctttatcgatgaaatccaccgcttg
agcccaatggttgaagaggtgctttatcccgcgatggaagactaccagctagatattatg
attggtgaaggtccggcagctcgctcaattaaaatcgatttgccgccatttaccttaatc
ggcgcgacgacacgtgctggttcactgacgtcaccattacgcgaccgttttggtatcact
cagcgtcttgagttttataagattaaagacctgcaggacattgttcagcgtagtgcggat
tgtttaggtctctctatggacccggaaggggctttagaggtcgcacgtcgtgctcgtggc
acacctcgtattgcaaaccgtttattacgtcgtgtgcgtgattatgcggaagtgaaaggc
aacggtcacatctgtgctgatgtcgctgataaagcacttaacatgcttgatgttgatgct
cagggcttcgactatatggaccgtaaacttctcctcgcgattatggagaagtttggcgga
ggtcccgttggcttagataatatggcagcggctattggtgaagaaaaagacaccatagaa
gacgtgctggaaccttatctgattcaacaaggttatttacaacgaacaccacggggtaga
attgccactgatcgggcttatctccactttggaatcgaaaaatag
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