Vibrio nigripulchritudo: VIBNI_A2929
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Entry
VIBNI_A2929 CDS
T02871
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00020
Citrate cycle (TCA cycle)
vni00270
Cysteine and methionine metabolism
vni00620
Pyruvate metabolism
vni00630
Glyoxylate and dicarboxylate metabolism
vni00680
Methane metabolism
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01120
Microbial metabolism in diverse environments
vni01200
Carbon metabolism
Module
vni_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vni_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vni_M00012
Glyoxylate cycle
vni_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VIBNI_A2929 (mdh)
00620 Pyruvate metabolism
VIBNI_A2929 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
VIBNI_A2929 (mdh)
09102 Energy metabolism
00680 Methane metabolism
VIBNI_A2929 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
VIBNI_A2929 (mdh)
Enzymes [BR:
vni01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
VIBNI_A2929 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
DUF5848
Motif
Other DBs
NCBI-ProteinID:
CCO58964
UniProt:
U4K8H6
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All DBs
Position
1:complement(3120098..3121033)
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AA seq
311 aa
AA seq
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MKVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAG
EDPTPALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVVCPSACVGIITNP
VNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKDKDPGDIRVPVIGGHSGV
TILPLLSQVEGVEFTDEEVEALTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLALVK
ALQGEEGVIECAYVDGGSEHAEYFAQPVKLGKNGVEEVLSYGEISAYEQAALDGMLDTLK
GDIAIGVDFAK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagccgtcattggtgccgcaggaggcattggccaagcacttgcacttctactc
aagaaccgtttaccagcaggttctgatcttgcactttacgatatcgctccagtcactcca
ggtgttgcagcggacttgagccacatcccaacgccggtttcaattaaaggttatgcaggt
gaagatcctacaccagcactggaaggtgcagacgttgtactgatttccgctggtgttgca
cgtaagccaggtatggatcgtgcggatctgtttaatgtgaatgcgggcatcgttaagtcg
cttgctgagaagattgctgttgtttgcccttcggcatgcgttggtatcattacaaaccca
gtaaacacgactgttccaattgctgcagaagtactgaagaaagcaggtgtttacgacaag
cgtaagctatttggtgtaactactctggacgttatccgttctgaaacttttgttgctgag
ctgaaagacaaagatccaggcgacattcgcgttcctgttatcggcggtcactctggtgtg
actattcttcctctgctttctcaagttgaaggtgtagagttcactgacgaagaagtcgaa
gctctgactaagcgtatccaaaatgcaggtactgaagttgtagaagcaaaagcgggtggc
ggtagtgcaacgctttcgatgggtcaggcggcatgtcgtttcggtctggcacttgttaaa
gcgcttcagggtgaagaaggtgttattgagtgcgcttacgttgacggtggcagcgagcac
gcagaatactttgctcagccagttaaacttggtaagaacggtgtagaagaagtattgagc
tacggtgagatcagtgcttacgagcaggctgcactggatggcatgttagatacactgaaa
ggtgatatcgctatcggtgttgacttcgcaaagtaa
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