Vibrio neocaledonicus: D3H41_04230
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Entry
D3H41_04230 CDS
T06228
Name
(GenBank) ROK family protein
KO
K02565
N-acetylglucosamine repressor
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnl03000
]
D3H41_04230
Transcription factors [BR:
vnl03000
]
Prokaryotic type
Other transcription factors
Others
D3H41_04230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR
HTH_24
Fe_dep_repress
SMC_ScpB
MarR_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QCO85339
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Position
1:complement(856355..857569)
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AA seq
404 aa
AA seq
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MNGGQIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIK
EVAQQASTGGRRAISLTTEVKPFHSIAVRLGRDYVQFSLYDLGGTALAEDQHELHYTNQA
DLIAGLIDLLKDFVSRCEDKIDQLIAIGITLPGLVNPTTGVVEYMPNTDIDNLALGEIVG
EKFNTACFVGNDVRGMALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGFNRNVG
EIGHIQIDPLGEQCQCGNFGCLETVAANPAIIQRVKQLITQGYESSLTDLENITIEAVCQ
HAMNGDELAKQSLVRVGNQLGKAIAITVNLFNPQKIVIAGDITAAQDIVFPAIQRNVENQ
SLKTFHNDLPIVASHIDKQPTMGAFAMIKRAMLNGVLLQKLLED
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggacagattggtaatgtagatttagtaaaacagcttaacagcgctgcggta
tataggctgattgatcagcaaggtcctatctcccgtattcaagtcgcggacgtgagtcag
ctcgcgcctgctagtgttaccaaaataacccgccaacttttagagcgcggccttattaag
gaggtcgcccaacaagcttcaactggtggtcgtcgtgcgatctctttgactactgaagtc
aaaccttttcattcgattgccgttcgcttaggtcgagattacgtacagttcagtttatac
gatttaggtggtaccgcgctggcagaagatcagcatgaactgcactacactaaccaagca
gacttaatcgcaggacttatcgatttattaaaagatttcgtaagccgttgcgaagacaaa
attgatcaactcatcgctatcggcatcactttaccgggccttgttaacccaacaactggc
gtggtcgaatacatgcctaataccgatatcgataatcttgctctcggtgaaattgttgga
gagaagtttaatacagcatgctttgttggcaacgacgtacgtggcatggcgttggctgag
cactactttggagcaagccaagactgccaggattctattttggttagcgtccaccgcggt
actggcgcaggtattatcgttaacggccaggtttttcttggttttaaccgcaacgtcggt
gaaattggtcatatccaaattgacccgcttggtgagcaatgccaatgtggaaactttggc
tgtttagaaaccgtagctgcaaacccagcgattattcaacgagtgaagcaactgattact
caaggatacgaatcaagcttaaccgaccttgaaaacatcacaattgaagcggtatgtcag
cacgcaatgaatggtgatgaacttgcgaaacagagtttagtgcgagtgggcaaccagcta
ggtaaagcgattgcgattacggttaacttatttaatccacagaaaattgtaattgctggc
gatattactgcagcacaagatattgttttccctgcaattcaacgcaacgtagagaatcaa
tctcttaaaactttccataacgacctccctatcgtggcttctcacattgataagcagcca
acgatgggcgcatttgcgatgattaaacgcgctatgctaaacggagttttgttacaaaag
ttactggaagactaa
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