KEGG   Vibrio neocaledonicus: D3H41_16180
Entry
D3H41_16180       CDS       T06228                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl00300  Lysine biosynthesis
vnl00470  D-Amino acid metabolism
vnl01100  Metabolic pathways
vnl01110  Biosynthesis of secondary metabolites
vnl01120  Microbial metabolism in diverse environments
vnl01230  Biosynthesis of amino acids
Module
vnl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    D3H41_16180 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    D3H41_16180 (lysA)
Enzymes [BR:vnl01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     D3H41_16180 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QCO87457
LinkDB
Position
1:complement(3265645..3266898)
AA seq 417 aa
MDYFNYQDDGQLWAEDVPLQALAEQYGTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAV
KANSNLGVLNTLARLGSGFDIVSGGELERVIAAGGDPKKVVFSGVGKTPAEMKRALELGI
KCFNVESEPELERLNKVAGELGVIAPISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAP
DVYKFAQSLPNLNVQGIDCHIGSQLTNIDPFIDATDRLLALIDDLKAQGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANAGILLTRVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVSPRKGEAQTYDLVGPICETGDFLGKDRALVLQE
GDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQREELTSLWQLEQILPE
NT seq 1254 nt   +upstreamnt  +downstreamnt
ttggattacttcaactatcaggatgatggccagctttgggccgaagacgtcccacttcaa
gctcttgcagagcaatatggcactcctctttacgtatattctcgagccacgctagagcgc
cattggaaagcgtttgatagtgctgtgggtcagcatcctcacctggtttgctacgcggtg
aaagccaactcaaacttaggcgtattgaacacgctagcgcgtttgggatcgggttttgac
atcgtgtcgggtggtgaacttgagcgtgtgattgccgcaggcggtgatccgaaaaaagtc
gttttctctggtgttggtaaaacaccggcagagatgaagcgcgctcttgagctaggtatc
aaatgtttcaacgttgaatctgagccagagctagaacgtttgaacaaggttgcgggtgag
cttggtgtgattgcgccaatttctcttcgtatcaatccagatgtcgacgcgaaaacacac
ccttacatttcgactggtcttcgcgacaataaattcggcattgcgtttgatcgtgcgcca
gatgtttataaattcgcgcaaagcctgccgaacttgaatgtgcaaggcatcgactgccac
attggttctcagctgaccaatatagacccatttatcgacgcgacagaccgtttattagcc
ctgattgatgatttaaaagcgcaaggcattaacattcgtcaccttgatgtcggcggtggt
ttgggtgtggtctatcgtgatgaattaccacctcagccttctgattacgccaaagcgtta
ctaggacgtcttgaaaatcaccaagacttggagctgatctttgagccaggccgtgcaatt
gctgcgaacgcaggtatcttgctaacgcgtgttgagtttttaaaacatactgagcataaa
aactttgcgattatcgacgctgcaatgaacgacttgatgcgtcctgcgctataccaagca
tggcaagatattgtgccagtttcaccgcgaaagggtgaagctcagacttacgacttggtt
ggtcctatttgtgaaaccggcgacttcttgggtaaagatcgcgcactcgttttgcaagaa
ggtgatctactcgcggttcgttcagcaggtgcctatggttttgtgatgtcttcgaactac
aatactcgtacccgagcggcagaagtgatggtggacggtaaacaaagccacttagttcgc
cagcgtgaggagctgaccagtttgtggcagctggaacagattctaccggagtaa

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