Vibrio neocaledonicus: D3H41_19070
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Entry
D3H41_19070 CDS
T06228
Name
(GenBank) quorum-sensing autoinducer synthase
KO
K10915
CAI-1 autoinducer synthase [EC:2.3.-.-]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl02024
Quorum sensing
vnl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3H41_19070
05111 Biofilm formation - Vibrio cholerae
D3H41_19070
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Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QCO88120
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Position
2:474025..475206
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AA seq
393 aa
AA seq
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MSETIQSKPLPSFIEERLDFYIQDLIEPNENKKHLVLGKRPPCNAVVLQSNDYLALSHNK
EIQNAHRDAISQHDDNVVMSAIFLQDDESKPVFETQLASFVGMPSCLLSQSGWAANVGLL
QTICAPNIPVYIDFFAHMSLWEGARIAGAQIHPFMHNNTSHLRKQISRHGSGIIVVDSVY
STIGTIAPLRDIYEIAQEFDCGLVVDESHSLGTHGPQGAGILQGLGLTHKVDFITVSLAK
TFAYRAGAILGPEKLAKTLPFVAYPAIFSSTVLPQEIIRLEKTLDVIRKSDDKRDILFER
AKSLAVGLKRIGFTIRSESQIIALECGNERNTERVRDFLEERNVYGAVFCRPATGRNKNI
IRFSVNADMTAAEVDHVLTVCQQAFAHPDLEFV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaactatacaaagcaaaccacttccctcctttatcgaggaacgcctagatttt
tatattcaagatctaatcgaaccgaatgagaacaaaaaacaccttgttcttggtaaacgc
ccaccgtgtaatgccgttgtcctgcaaagcaatgattaccttgcactgtctcataataag
gagattcaaaacgcgcatcgtgatgcgatttcccagcacgatgacaacgtcgtgatgtcc
gcgattttcttacaagacgatgaatcgaaacctgtatttgaaacgcaactagccagtttc
gttggtatgcctagttgtctactttctcaatctggttgggctgcgaatgtcggtttattg
cagactatttgtgcaccgaacatacctgtgtacattgatttctttgcacatatgtctttg
tgggaaggcgcacgtattgccggagcacaaattcatccgttcatgcataacaacaccagt
cacctaagaaagcagatttcacgtcacggttcagggatcattgttgtggattcggtttac
agcactatcgggaccatcgctcctctacgtgatatctacgaaatagcacaggagtttgac
tgcggcctggttgtagatgaatcacactctttaggtacacacggtccacaaggtgcgggg
atactgcagggtcttggcttaactcataaggtagattttattaccgttagtcttgccaag
acatttgcttatcgtgctggcgcgattttaggcccagaaaaactggcgaagacgcttcca
tttgtggcgtaccctgcaatatttagttctaccgtattaccgcaagagatcattcggcta
gagaaaacactggacgtcataagaaaatcagatgataagcgagatattctgtttgaaaga
gccaagtctttagccgttggtttaaaacgcattggatttactattcgcagtgaatcacaa
attatcgcattagaatgcggcaacgagagaaacactgagcgagtccgcgactttctcgaa
gagcgaaatgtttacggcgcagtgttttgccgccctgcaactggaaggaacaaaaacatc
attcgtttttcagtcaatgcagacatgacagctgctgaagttgatcatgtactcactgtc
tgccaacaagcatttgcacaccctgacttagagtttgtataa
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