Vibrio navarrensis: IF132_19900
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Entry
IF132_19900 CDS
T07785
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vnv
Vibrio navarrensis
Pathway
vnv05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IF132_19900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnv03000
]
IF132_19900
Transcription factors [BR:
vnv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
IF132_19900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
NPR1_like_C
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QOD70872
LinkDB
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Position
1:complement(2840749..2841636)
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AA seq
295 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFFHECSPLLQRLMSAAEEITDECRGASGKIKISTPYNLTKRMMMPMLNGFMHKYPDI
NIELTTENNADQLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPAYLSNHPAPTHA
EDLHYHSLLKGHPLMKWSLSNSKGETVINVDRGRFQANALNVVRSACSEGLGITLMPDVM
IREYIANGSLVRILPDWSANPRDIYMLYNHKDHLPEKVRLFIDYVIVYDLHEYRN
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagatgatctaaacctatttcgattagtagtcgaaaatgggagctataccgca
acttcgcgcaaaaccatgattcccgtggcgaccattacccgacgcattcaagccctagaa
gactccgtaaatttacgcctgctcaatcgacacgcgcgtaaactgtctctgactgaggcg
ggggagcgcttcttccatgaatgctcaccgttactgcaacggctcatgagcgcagcggaa
gagatcacagatgaatgccgcggtgcatcagggaagatcaaaatctcaaccccatacaat
ctgaccaaacgcatgatgatgccgatgctaaacggcttcatgcacaagtaccccgatatc
aatatagaactgacgacggaaaacaatgctgatcagcttgacccaaccgaatgggatgtc
atttttcgcgtcggcccacaacgtgactccagcttgattgcgcgcaaaatcggcgaagtc
aaagacattttagtcgccagcccagcgtatctgagtaaccatcctgctccgactcatgcg
gaagatctgcactaccactcgctgttaaaaggccaccctttgatgaaatggtcgctaagc
aatagtaaaggcgagacggtgattaacgtcgacagaggacgctttcaagccaatgcgctc
aatgtagtacgcagcgcttgttctgaaggtttgggcattactttgatgccggatgtgatg
atccgtgaatacatcgccaatggcagtctggtacgtatcctgcccgattggagcgcaaac
ccacgcgacatttacatgctgtataaccataaagatcatctgccagagaaggtgcgcctg
tttattgattacgtgattgtctacgacctgcacgagtacaggaactga
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