Vibrio owensii: A9237_12165
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Entry
A9237_12165 CDS
T04844
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vow
Vibrio owensii
Pathway
vow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A9237_12165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vow03400
]
A9237_12165
Enzymes [BR:
vow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A9237_12165
DNA repair and recombination proteins [BR:
vow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A9237_12165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
RecD_N
Helicase_RecD
AAA_11
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
AAA_22
nSTAND3
AAA_16
CbiA
DEAD
UvrD_C
AAA_28
TrwB_AAD_bind
ResIII
MukB
T2SSE
AAA_7
DUF87
SRP54
RNA_helicase
ABC_tran
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
AQW58759
LinkDB
All DBs
Position
1:2658782..2660959
Genome browser
AA seq
725 aa
AA seq
DB search
MKTNDLLSEQSSPVATRDLAATPDLLATLESLAKKGAIRQLDFQFARFIYSQVEQQANSQ
ELAFIAGVVSSELGKGHICLPLFDSQGQPADLASKLGLFGESALALNTQLQGVNWVELLQ
ASPLVGVQGEALPMMFDGERLYLHRYWHYEVTLAVKLNQLSAAVNLQPQEFTRLSELLHH
LFARQYHFLFNALAKVAEAGTSNQVLRQQLVCDHLDVVTVDSLDWAAIDAAVCQAKQVHD
LQVLEKLVPLSACVNWQKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQAGQEKN
LTIKLVAPTGKAAARLTESIGKAIQELPVEPELKAKIPTESSTLHRLLGAIPNSAEFRHN
KQNPLHLDILVVDEASMVDLPMMYKVVDALPKHSRLILLGDKDQLASVEAGAVLGDICSF
HAFGFGKEQASAVAKLTGFDTLAYSTNSNASIADSLCMLQKSYRFDARSGIGQLAKAVNA
GSAAKVDDVWNRDFADIEHFALSSQNYNQMMQTLVAEYGRYLKRIGQQEIDQKTGEPETL
THKAKAVLDTFNQCRLLCAIREGDFGVTGLNQRIEKALAARKLIQTQDELWYHGRPVMVT
RNDHGLGLYNGDIGICMRDDSEGEPRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKS
QGSEFEYTLMILPPDFSPILTRELIYTGITRAKKRLAMFAEMNVLKRGIKVKTTRASGLV
SRLSS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaatgatcttctttctgagcaaagcagccctgtggcaacacgagatctagcg
gcaacgccagatctattggcaactttagaatcgttggcaaaaaaaggagcgattcgtcaa
ttggatttccagttcgcgcgctttatctattcgcaagttgagcaacaagcgaacagccaa
gagctggcatttattgctggcgtggtcagcagtgaattaggcaaagggcacatctgtttg
cctctgtttgatagccaagggcaaccagcggaccttgccagtaagcttggtctgtttgga
gagtctgcgttagcgcttaatactcagctgcaaggtgttaactgggttgagcttctgcaa
gcgtcgcctttggttggtgttcaaggtgaagccttgccaatgatgtttgatggtgagcgt
ctctacttgcatcgttactggcactatgaagtgacgttggcggtcaagctcaatcaactc
agtgcagctgtaaaccttcagcctcaagagttcacacgtttgtctgagttgcttcatcat
ttattcgctcgtcagtaccactttctgttcaatgcactagccaaagtggcagaggcagga
accagtaaccaagtgctacgccagcagctagtctgtgaccatttagatgtggtcactgta
gacagtctcgattgggctgccattgatgcggcagtctgccaagcgaaacaagttcacgat
ctgcaagtgctggagaagcttgtaccactatcggcttgtgttaactggcagaaggtcgct
gcggcggtggctctgacacgtcgtttcgcggtgatttctggtggtccgggtacgggtaaa
accactacggtaaccaaactgcttgccgcattgattgagcaagcaggacaagagaaaaat
ctcactatcaagctggtggcgccgacgggtaaagcggcagcacgtttgacggagtcgatt
ggtaaagcgattcaagagttgccagtggagcctgagcttaaagcgaaaattccaaccgag
tcgagcactttgcatcgcctgttgggcgcgattccaaacagtgcagagtttcgtcacaac
aaacaaaatccgctgcacctcgatattttagtggtggatgaagcctccatggtcgatttg
ccgatgatgtacaaagtcgtcgatgcgctaccaaaacattcacgtttgattcttctcgga
gataaagatcaattggcatcggtagaagcaggtgcggtgctcggtgatatctgttcgttc
cacgcatttggctttggcaaagagcaggcgtctgcggtcgcgaagttaacaggctttgac
accttggcgtacagcaccaacagtaatgcttcgattgccgatagcttatgtatgctgcaa
aagagttaccgattcgatgctcgctccggtatcggtcagctagcgaaagcggtcaatgct
ggctcagccgcaaaagtagacgacgtttggaatcgtgattttgctgatatcgagcatttc
gcactgagtagccaaaactacaatcagatgatgcagactttggttgccgaatatggtcgt
tatttaaaacgcatcggacagcaagagattgaccaaaagacaggggaaccagaaacactg
acccacaaagctaaagccgtgttggatacctttaatcaatgccgattattgtgtgctatc
cgtgaaggtgattttggtgtgaccggtttaaaccaacgcattgaaaaagcactcgcggca
cgtaagttgattcaaacccaagatgaactttggtatcacggcaggccagtgatggtcacg
cgtaatgatcatggcttgggattgtataacggtgatatcggtatttgtatgcgagacgac
agcgaaggagagccgcgtcttaaagtgttctttgaactaccggatggcagcgtgaagtcg
gtgctgccaagccgagtccctgagcatgaaaccgcatatgcgatgacgattcataaatca
cagggcagtgaatttgagtacacgctgatgattttgccaccagatttcagcccaatcctt
actcgcgagctgatctacacaggtattactcgcgcgaagaaacgccttgcgatgttcgct
gagatgaatgttctcaagcgcggaattaaagtaaaaaccacccgagcgagtgggttggta
tctcgcttatctagttaa
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