Vibrio parahaemolyticus RIMD 2210633: VP2848
Help
Entry
VP2848 CDS
T00120
Name
(GenBank) putative alanine racemase
KO
K25317
amino-acid racemase [EC:
5.1.1.10
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00260
Glycine, serine and threonine metabolism
vpa00270
Cysteine and methionine metabolism
vpa00310
Lysine degradation
vpa00470
D-Amino acid metabolism
vpa01100
Metabolic pathways
vpa01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VP2848
00270 Cysteine and methionine metabolism
VP2848
00310 Lysine degradation
VP2848
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VP2848
Enzymes [BR:
vpa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.10 amino-acid racemase
VP2848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
BAC61111
UniProt:
Q87KX6
LinkDB
All DBs
Position
1:3015397..3016575
Genome browser
AA seq
392 aa
AA seq
DB search
MGQTAAHAAPLLVDFDDSEREERVQASNAWLEIDTQAFSNNIQLLQKDLKGNTQICAIMK
ADAYGNGIAGLMPSIIANNVACVGITSNEEARVVREHGFEGKIMRVRAASRNEIENGVQY
EIEELIGTKMQADQIIEIAYNYNTVIPVHLALNTSGMGRNGLDLTTYEGQVEGVEIASDP
NLKIVGMMTHFPNEGLDEIRRKVDRFKVETKWLMDSAGLKRKDITLHVANSYITLNLPEA
HLDMVRPGGMLYGDYPATLPYERIVSFKTRIASLHFFPAGSTIGYGSTKVLERDSILANL
PIGYSDGFARSLSNKADVLINGQRARVMGKASMNTTMVDVTDIIGVQANDEVVVFGRQGF
EEITAEETEEKSGRILPEHYTIWGATNPRVYR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaacagccgcacatgccgctcctctgctagttgattttgatgacagcgagcgc
gaagagcgcgttcaggcgagcaacgcttggctggaaattgatactcaggcattttcaaat
aatattcagttgcttcagaaggatctaaagggcaacactcagatctgtgccatcatgaag
gctgacgcgtacggtaacggtatcgcaggcctgatgcctagcatcatcgcgaacaacgtt
gcatgtgtgggtatcaccagtaatgaagaagctcgcgtagtgcgtgagcatggcttcgaa
ggcaagatcatgcgtgtccgtgcggctagccgcaacgaaattgaaaacggcgtacagtac
gaaatcgaagagctgattggcactaaaatgcaggcggatcaaatcatcgagattgcatac
aactacaataccgttattcctgttcaccttgctctgaatacttcaggcatgggtcgtaat
ggtctggatctgacaacgtatgaaggtcaggttgaaggtgtggaaatcgcaagcgatcct
aacctaaaaatcgtaggtatgatgacccacttcccgaatgaaggtcttgatgaaatccgc
cgcaaggttgaccgtttcaaagtagaaacaaagtggctaatggacagcgcaggtctgaaa
cgtaaagacatcacactgcacgtggctaactcttacatcacgctaaatctgcctgaagca
catctggatatggttcgtcctggcggcatgctgtacggtgactaccctgcaaccctacct
tacgagcgcatcgtgtctttcaaaacacgcatagcatcactgcacttcttccctgcaggc
agcacaatcggctacggcagcactaaagttttagagcgtgactctatcctggctaaccta
cctatcggctactcagacggtttcgcccgttcactaagcaacaaagctgatgttctgatc
aacggtcagcgtgctcgcgtaatgggtaaagcgtcaatgaacactactatggttgatgtc
actgacatcattggtgtccaggcaaacgacgaagtagttgtatttggccgccaaggcttt
gaagaaatcacagcagaagaaaccgaagagaaaagcggtcgtattctgcctgagcactac
actatctggggtgcaactaaccctcgcgtttaccgttaa
DBGET
integrated database retrieval system