Vibrio parahaemolyticus RIMD 2210633: VPA0939
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Entry
VPA0939 CDS
T00120
Name
(GenBank) putative adhesin
KO
K26937
MATE family, multidrug efflux pump
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpa02000
]
VPA0939
Transporters [BR:
vpa02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
VPA0939
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
BAC62282
UniProt:
Q87HM4
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All DBs
Position
2:970660..972045
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AA seq
461 aa
AA seq
DB search
MLLTREYIDKAFWQKLIAIGLPVSLQSMLFALLGVVDIFMVSLLGESATAAVGVGNRIFF
FNLAVVFGLCGAVTVLASQYYGSGNMAGIRRTLAQSWCISILVTLPFIVLYAIFDEEIVS
FMSDDPEYVTYARDYLVVTGFSLIATAIVVPIEAVLRSVGQTKLATNVSISAIVVNAVLN
SVLIFGLFGFPQWGVFGAAVGTFVSRFFQTAVLIYFFYNRYAHLIPTKFDWAQGRLKQYR
QKYFKVSLPMLVHDALWTGGLIVYSIIYGQLGVSELAIISFLSPIEGVLISTFMGFAVAA
SVLLGNDIGAKHYDRVEKTAWWYVLTSAILATLLFFLVWLSSPLIHHLLVLSPLTDAEMA
LNVCLVMALGMILRVFNMVGIGGVLKSGADIRYSIFIDTFGQWAIGIPLTYYTGMVLGLP
LHFVLMSLLAEEFVKGVLTTYRIQSKRWINNMVEDDQTVTA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgctcttaacacgcgaatacatcgataaagcattttggcaaaagctgattgcgattggc
ctccctgtttcactgcaatccatgctttttgcgttgctcggcgtcgtggatattttcatg
gtgagtctactcggcgaatccgcaacagctgcggtcggtgtcggaaaccgcatctttttc
ttcaaccttgcggtcgtttttggcctgtgtggtgcggtaacggtgctggcttctcaatat
tacggctcagggaatatggcgggaattcgcagaacgttggcgcagtcttggtgtatttcc
attttagtgacactgccatttattgttctttatgcgatttttgatgaagagatcgtctct
ttcatgtcagacgatcctgaatacgtcacttatgcacgtgactatcttgtggttacgggc
tttagtctcattgcaacggcgatagtggtaccgattgaagcggtattgcgctccgtaggc
caaaccaaactggcaaccaacgttagtatctccgccattgttgtgaatgccgtgctgaac
tccgttttgattttcggtttatttggatttcctcaatggggcgtatttggtgcagcagtc
ggtacttttgtttctcgatttttccagactgcggtattgatttactttttctacaaccgt
tatgcgcacctgattccgaccaaattcgactgggcgcaaggccgtttaaagcagtatcgt
caaaaatactttaaggtttctctacccatgttggtccacgatgcactctggactggtggg
ctgatcgtttacagcatcatctatggtcaattgggcgtttcagaacttgcgatcatctca
ttcttatcgccaattgaaggtgtactgatttcaacctttatgggatttgcggtcgctgca
tccgttcttcttgggaatgatattggcgcaaaacattatgatcgggtcgagaaaacagcg
tggtggtatgtgttaaccagcgcaatcttagccaccttactgtttttcctagtgtggttg
agctcgcctttgattcatcatctattggtgctgagcccattaaccgatgcagaaatggca
ctcaacgtatgcttagtcatggcgctgggtatgattttgagagtgtttaacatggtaggg
attggcggcgtactaaagagtggtgcggatattcgctacagcatttttattgatacgttc
ggtcagtgggctattggcattccccttacctattacactggtatggtactcgggttgcct
ttgcattttgtcttgatgtctctgctagctgaagaatttgtgaaaggcgtactgacgact
tatcgtatccaatctaaacgttggataaacaatatggtcgaagatgaccaaacggtgaca
gcgtaa
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