Vibrio parahaemolyticus BB22OP: VPBB_0018
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Entry
VPBB_0018 CDS
T02409
Name
(GenBank) Periplasmic alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00500
Starch and sucrose metabolism
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VPBB_0018
Enzymes [BR:
vpb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
VPBB_0018
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Gene cluster
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Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF6034
DUF5640
Motif
Other DBs
NCBI-ProteinID:
AGB08545
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Position
1:complement(17061..19145)
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AA seq
694 aa
AA seq
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MKKTILALSIGLLSACSQIPENAIVLSVGDDTAVLEPNSDGLLVAEQKLEKGNYTFTIAD
SKQTCGNSFALAEESRIKFNTPLKMDNCATDTSMPLRIFKANTYLFTLNPDTNELTVKIK
PKQSQDITYSCPVATDTAKTINVAQTFTDGTVVRDALTGQEATVANGSVTMQPGPMSQGL
LLLEEVEQQADKPFSWDNATVYFVMTDRFYNGNPDNDNSYGRSKDGKYEIGTFHGGDLAG
LTKKLDYIESLGVNAIWITSPLEQIHGWVGGGDKGDFKHYGYHGYYHQDWTKLDANMGTK
DELRTFIDTAHKKGIRVIWDVVMNHTGYATLADMQEFGFGQLYLDDQEAKQVLGEKWTDW
QPKSGQSWHSFNDYIKYGDSEAWEKWWGKDWIRTDIGDYDAPGYNDITMSLNYLPDLKTE
STQKTGLPNFFRNKNTNAQDELKTPREHLITWLSDWVRDYGIDGFRVDTAKHVEMEAWAE
LKASTSQALAEWKQNHPDKALDDLPFWMTGEVWAHSVVKSPYFDNGFDSIINFEFQSDVA
PKALKCFAQLDNDYRRYAERINSDPEFNVLSYLSSHDTQLFWSARSRSFDDQARAANALM
LAPGAVQIYYGDEIARDFGVTGSDPTQGTRSDMPWDKIHGEREDLLQHWQKLGEFRQRHP
AVAQGKHITRNQEGYYAFERQYQDDKVLIVYTGE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaattctcgcactctctatcggcctactgagcgcctgcagccaaattcca
gaaaatgccatcgtattaagcgttggagacgatactgccgtcttagaaccaaactcagac
ggtttactcgtcgcagagcaaaaactagaaaaaggcaactacacctttaccattgccgac
agcaaacaaacctgtggcaacagctttgcgctagcggaagaaagccgcatcaaattcaat
acaccattaaaaatggataactgtgcaaccgacacatctatgccgctgcgcattttcaaa
gccaatacctacctcttcacgctcaatccagacacaaatgagctaaccgttaaaatcaaa
ccaaaacagagtcaggacatcacctattcttgccctgttgcaaccgacacagctaaaacc
atcaacgtagcccaaacctttactgatggcactgttgttcgtgacgccttaaccgggcaa
gaagccaccgtcgccaatggcagcgtaaccatgcaaccaggcccgatgagccaaggtcta
ttgctgttagaagaggttgaacagcaagccgataaaccgtttagctgggataacgcgacg
gtgtacttcgtcatgaccgaccgcttctacaatggtaacccagacaatgacaacagctac
ggtcgcagcaaagacggcaaatacgagattggtaccttccacggtggtgacttagcgggt
ctgacgaaaaaactcgattacatcgaatccctcggtgtgaatgccatctggataacctca
ccactggaacaaatccacggctgggttggcggcggcgataaaggcgactttaagcactac
ggctaccacggctactaccaccaagattggaccaagcttgatgccaacatgggtaccaaa
gatgagctgagaaccttcatcgataccgcgcacaagaaaggcatccgcgtgatttgggat
gtggtcatgaaccacactggctacgccacattagccgacatgcaggaattcggctttggt
caactttaccttgatgaccaagaagccaaacaagtacttggtgaaaaatggaccgactgg
caaccaaaatcaggacaaagctggcacagcttcaacgactacatcaaatacggtgatagt
gaagcgtgggaaaaatggtggggcaaagattggattcgcaccgacattggcgattacgat
gcgccgggatacaacgacatcaccatgtctttgaactacctaccggatctcaaaaccgaa
tcgacgcagaaaaccggactaccaaacttcttccgcaataaaaacaccaatgcgcaagat
gagttgaaaaccccacgagaacatctgatcacatggctatcggattgggtacgtgattac
ggcattgatggcttccgcgtcgataccgccaaacacgttgagatggaagcgtgggcagag
ctcaaagcaagtaccagtcaagccctcgccgaatggaagcaaaaccaccccgacaaagca
ctcgacgatctgccattttggatgactggcgaagtgtgggcacacagcgtggtgaagagc
ccgtatttcgataacggcttcgattcgatcatcaacttcgagttccaatctgacgtggct
ccaaaagcgctaaagtgtttcgctcaacttgataatgattaccgccgctatgcagagcgt
attaactccgatcctgaattcaacgtgttgagttacctgtcttcgcacgatactcaactg
ttttggtcagcacgcagccgcagcttcgatgaccaagctcgcgccgccaatgcgttaatg
ctggcaccgggtgcagtacaaatctactacggcgatgagattgctcgtgactttggcgta
actggatccgatccgacccaaggtacacgttccgacatgccatgggacaagattcatggc
gagcgtgaagacttactacaacattggcagaaattgggcgaattccgtcaacgccaccca
gcggttgctcaaggtaagcacatcactcgtaatcaagaaggctactacgctttcgaacgc
caataccaagacgacaaagtactgattgtttacactggcgaataa
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