Vicugna pacos (alpaca): 102545673
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Entry
102545673 CDS
T08098
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03015
mRNA surveillance pathway
vpc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102545673 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102545673 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102545673 (CPSF7)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102545673 (CPSF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
102545673
NCBI-ProteinID:
XP_006214939
UniProt:
A0A6J0AY05
LinkDB
All DBs
Position
25
AA seq
471 aa
AA seq
DB search
MSEGVDLIDIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPS
PKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRECVRV
PRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP
PIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLTVPPPGAIPPALHLNPAFFPPPN
ATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEEIMKRNRAISSSAISKAVSGAS
AGDYSDAIETLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKR
HRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQERNREHERHRDRERDRHH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggagtggacttgattgatatatatgctgacgaggagttcaatcaggaccca
gagttcaacaatacagatcagattgatctgtatgatgacgtgttgacagccacctcacag
ccctcagatgacagaagcagcagtactgagccacctcctcctgttcgccaggagccatct
cccaagcccaataacaagacccctgcaattctgtacacctacagtggtctgcgtaacagg
cgagctgctgtctatgtgggcagcttctcctggtggaccacagaccagcagctgatccag
gttattcgctctataggagtctatgatgtggtggagttgaaatttgcagagaatcgagca
aatggccagtccaaagggtatgctgaggtggtggtagcctctgaaaactctgtccacaaa
ttgttggaacttctgccaggaaaagttcttaatggagaaaaagtggacgtgaggccggcc
acccggcagaacctgtcacagtttgaggcacaggctcggaaacgtgagtgcgtccgagtc
ccaagagggggaatacctccacgggcccactccagggattctagtgattctgctgatgga
cgggccacaccctctgagaaccttgtaccctcatctgcccgtgtggataagccccccagt
gtgctgccctacttcaatcgccctccttcagcccttcccctcatgggtctgcccccaccc
ccaattccacccccaccacctctctcctcaagctttggggtccctcctcctcctcctggc
atccactaccagcatctcatgccccctcctcctcgattacctcctcatctgactgtacct
ccccctggggccatcccacctgcccttcacctcaatccagccttcttccccccaccaaac
gccacagtggggcctccaccagatacttacatgaaggcctcagcaccctataaccaccat
ggcagccgagattcgggccctccgccctctacagtgagtgaagcagaatttgaagagatc
atgaagcggaacagggcaatttccagcagtgccatttccaaagcagtatctggagccagt
gcaggggattacagtgacgccattgagacgctgctcacagccattgctgttatcaaacag
tcccgggtcgccaatgatgagcgttgccgtgtcctcatctcctctcttaaggactgtctt
catggcattgaagccaagtcttacagtgtgggtgccagcgggagctcgtccaggaaaaga
catcggtccagagagaggtcacctagccggtcccgggagagcagcaggaggcaccgagac
ctgcttcataatgaagatcggcatgatgattatttccaagaaaggaaccgagagcacgag
agacaccgggatagagaacgggaccggcaccactga
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