Variovorax paradoxus B4: VAPA_1c12770
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Entry
VAPA_1c12770 CDS
T02835
Name
(GenBank) peptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c12770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c12770
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VAPA_1c12770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
AAA_7
AAA_29
Mg_chelatase
nSTAND1
CbiA
Motif
Other DBs
NCBI-ProteinID:
AGU48392
UniProt:
T1X642
LinkDB
All DBs
Position
1:1397938..1398975
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AA seq
345 aa
AA seq
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MTNATTTPRLTVSNLSTSFPTEDGLIRSVADVSFSIQPGRTTALVGESGSGKSVTSLTLM
RLLPKTANAQVSGQASFVTREGKTLDLLQIGEREMRSLRGNQLSMIFQEPMTSLNPVFTI
GEQIAESVRLHKGLDRKAAMAHALRMLELVEIPAAAQRIHEFPHQLSGGMRQRVMIALAM
ACDPTLLIADEPTTALDVTIQAQILELMRRLQAETGMSILFITHNLGVVAHHADDVVVLY
AGRVVESAPVRPLFARPEHPYTQGLLACLPGKARLPGQPKPKRLFAIRGQVSSPLSPPPG
CAFEPRCDHALAGCSAAIPPLIDIRQDRQARCIRVQPDAQIARVA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgccacgaccaccccgcgtctcacggtcagcaacctgagcaccagctttccc
accgaagacggcctgatccgttcggtggccgatgtgagcttctcgatccagcccggcagg
acgaccgcgctggtcggcgaatcgggctcgggcaagtcggtcaccagcctcacgctgatg
cgcctgttgcccaagaccgcgaacgcgcaagtcagcggccaagcctctttcgtgacccgc
gagggcaagacgctcgacctgctgcagatcggcgaacgcgagatgcgcagcctgcgcggc
aaccagctgtcgatgatcttccaggagccgatgaccagcctgaacccggtcttcaccatc
ggcgagcagattgccgagagcgtgcggctgcacaagggcctggaccgcaaggcagccatg
gcccatgcgctgcgcatgctggagctggtcgagattccggcagcggcgcagcgcatccac
gaattcccgcaccagctctcgggcggcatgcgccagcgcgtgatgatcgcgctggcgatg
gcctgcgacccgacgctgctgattgccgacgagcccaccaccgcgctcgacgtcaccatc
caggcgcagatcctcgaactcatgcgccggctgcaggccgagaccggcatgagcattctc
ttcatcacccacaacctcggcgtggtcgcgcaccacgcggacgacgtggtggtgctctac
gcggggcgcgtggtcgagagcgcgcccgtgcggccgctgttcgcgcggcccgagcatccg
tacacgcagggcctgctggcctgcctgccgggcaaggcgcgcctgccggggcagcccaag
cccaagcggctgttcgcgatccgcggccaggtgtcgagcccgctctcaccgccgccgggc
tgcgccttcgagccgcgctgcgaccatgcgctggcgggctgcagcgccgcgattccgccg
ctgatcgacatccgccaggaccgccaggcgcgctgcattcgcgtgcagccggacgcccag
atcgcgagggtcgcatga
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