Variovorax paradoxus B4: VAPA_1c12930
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Entry
VAPA_1c12930 CDS
T02835
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd02010
ABC transporters
vpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAPA_1c12930
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAPA_1c12930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c12930
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
VAPA_1c12930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
DO-GTPase2
AAA_25
AAA_23
AAA_22
SMC_N
AAA_16
AAA_30
AAA_19
AAA_27
IstB_IS21
NACHT
NB-ARC
PhoH
AAA_33
nSTAND3
RsgA_GTPase
cobW
MobB
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AGU48408
UniProt:
T1X759
LinkDB
All DBs
Position
1:complement(1414051..1414782)
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AA seq
243 aa
AA seq
DB search
MSTSVLQLDGFCVAYRSVEAVHSVRLHVNEGEIVTVIGPNGAGKTTLLCAAMGLLASTGS
LALHGERIARPSVETMVARGVALVPERRELFGEMSVEDNLLLGGFYQWRKGKRDQRARME
EVFEIFPRLRERRPQLASTLSGGERQMLAIGRALMARPRLLMLDEPSLGLAPLVVREVLR
VVSQLRSHGVSVLLVEQNARAALQVADRAYVLEMGAVALEGNARDLMHDQRIIDTYLGIG
NKH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtctgtccttcaactcgacggcttctgcgtcgcctaccgcagtgtcgaagcg
gtgcacagcgtgcgcctgcacgtgaacgagggcgagatcgtcaccgtgatcggccccaac
ggcgcgggcaagaccacgctgctgtgcgcggcaatggggctcttggcctccaccggaagc
ctcgcgctgcatggcgagcgcatcgcacgccccagcgtcgagaccatggtggcgcgcggc
gtggcgctggtgccggagcggcgcgagctgttcggcgagatgtcggtcgaagacaacctg
ctgctcggcggcttctaccagtggcgcaagggcaagcgcgaccagcgcgcgcgcatggaa
gaagtgttcgagatctttccgcgcctgcgtgaacggcgtccgcaactggcatcgacgctc
tccggcggcgaacgccagatgctggccatcggccgcgcactgatggcacgcccgcggctg
ctgatgctcgacgaaccctcgctcggcctggcgccgctggtggtgcgcgaagtgctgcgc
gtggtctcgcaactgcgaagccatggcgtctcggtgctgctggtggagcagaacgcacgc
gccgcattgcaggtggccgaccgggcctatgtgctcgagatgggcgccgtcgcgctcgaa
ggcaatgcacgcgacttgatgcacgaccaaagaatcatcgacacctacctgggtatcggc
aacaagcactga
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