Variovorax paradoxus B4: VAPA_1c14920
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Entry
VAPA_1c14920 CDS
T02835
Symbol
lepA
Name
(GenBank) elongation factor 4 LepA
KO
K03596
GTP-binding protein LepA
Organism
vpd
Variovorax paradoxus B4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
LepA_C
EFG_C
GTP_EFTU_D2
Ras
MMR_HSR1
EFG_III
RF3_C
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
AGU48604
UniProt:
T1X8H7
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Position
1:1628338..1630149
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AA seq
603 aa
AA seq
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MNHIRNFSIIAHIDHGKSTLADRLIQRCGGLAEREMEAQVLDSMDIEKERGITIKAQTAA
LHYKALDGQVYNLNLIDTPGHVDFSYEVSRSLSACEGALLVVDASQGVEAQTVANCYTAL
DLGVEVVPVLNKMDLPNADPDNARSEIEDVIGIDATDAIPCSAKTGLGIDEILEAIVHKM
PAPRGNPDGPLRAMIVDSWFDPYVGVVMLVRVVDGRLVKGERIKMMASGAMYNADNIGVF
TPANEPRPSLEAGEVGYIIAGIKELQAAKVGDTVTLIKPGTGGAAATATEALPGFKEIQP
QVFAGLYPTEASEYDSLRDALEKLKLNDSSLRYEPEVSQALGFGFRCGFLGLLHMEIVQE
RLEREFDQDLITTAPSVVYQVVRNDGEVIMVENPSKMPDVGKMSEIREPIVTVHLYMPQE
YVGAVMTLANQKRGVQMNMAYHGRQVMLTYEMPLGEIVLDFFDKLKSVSRGYASMDYEFK
EYRASDVVKVDILLNGEKVDALSIIVHRSQSQYRGRAVVSKMREIISRQMFDVAIQAAIG
VNIIARETIKALRKNVLAKCYGGDITRKKKLLEKQKAGKKRMKQIGSVEVPQEAFLAILQ
VED
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacatcagaaatttttcgatcattgcgcacatcgatcacggcaagtcgacgctc
gcagaccgcttgatccagcgttgcggcggccttgcggaacgcgagatggaagcgcaggtg
ctcgactcgatggacatcgaaaaagagcgtgggataaccatcaaggcgcagaccgccgcg
ctgcactacaaagccctcgatgggcaggtctacaacctcaatctgatcgacacgccgggc
cacgtcgacttctcatatgaagtgagccgctcgctgtcggcgtgcgaaggcgcgctgctc
gtcgtcgatgcatcgcaaggcgtcgaagcgcagacggtggccaactgctacaccgcgctc
gacctcggcgtcgaagtggtgccggtgctcaacaagatggatctgcccaacgcggacccc
gacaacgcacgcagcgaaatcgaagatgtgatcggcatcgacgcgaccgatgcgattccg
tgttccgccaagaccggcctcggcatcgacgagattctcgaagccatcgtccacaagatg
ccggcgccgcgcggcaatcccgacggcccgctgcgcgccatgatcgtcgacagctggttc
gacccctacgtcggcgtcgtcatgctggtgcgcgtggtggacggccggctggtgaagggc
gagcgcatcaagatgatggcgtccggcgccatgtacaacgccgacaacatcggcgtcttc
acgccggccaacgaaccgcgcccttcgctcgaggccggcgaggtgggctacatcatcgcg
ggcatcaaggaactgcaggccgccaaggtcggcgacacggtgacgctgatcaagccgggc
acgggcggcgcggccgccaccgccaccgaggcgctgccgggcttcaaggaaatccagccg
caggtgtttgccggcctctatccgaccgaggccagcgagtacgactcgctgcgcgacgcg
ctggaaaagctcaagctcaacgattcgtcgctgcgctacgagcccgaggtgagccaggcg
ctgggcttcggcttccgctgcggcttccttggcctgctgcacatggaaatcgtgcaggag
cgcctggagcgcgagttcgaccaggacctgatcacgaccgcgccgagcgtggtctaccag
gtggtgcgcaacgacggcgaagtcatcatggtcgagaacccgtccaagatgcccgacgtc
ggcaagatgagcgagatccgcgagccgatcgtcaccgtgcacctttacatgccgcaggaa
tacgtcggcgccgtcatgacgctggccaaccagaagcgcggcgtgcagatgaacatggcc
taccacggccgccaggtcatgctgacctacgagatgccgctcggcgagatcgtgctcgac
ttcttcgacaagctgaagtcggtcagccgcggctacgcctcgatggactacgagttcaag
gaatatcgcgcgtccgacgtggtcaaggtcgacatcctgctgaacggcgagaaggtcgat
gcgctgtcgatcatcgtgcaccgcagccagtcgcagtaccgcggccgggcggtggtgtcg
aagatgcgtgagatcatttcgcgccagatgttcgacgtggcgatccaggccgccatcggg
gtcaacatcattgcgcgtgagacaatcaaggcgctgcgcaagaacgttcttgccaagtgc
tacggcggcgacatcacccgcaagaagaaactgctcgagaagcagaaagcgggcaagaaa
agaatgaagcagatcggctccgtcgaggtcccgcaagaggccttcctcgcgattctgcaa
gtcgaagactga
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