Variovorax paradoxus B4: VAPA_1c18280
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Entry
VAPA_1c18280 CDS
T02835
Name
(GenBank) HlyD domain-containing protein
KO
K25190
membrane fusion protein PltH
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpd02000
]
VAPA_1c18280
Transporters [BR:
vpd02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Pyoluteorin transporter
VAPA_1c18280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Peptidase_M23
HR1
Motif
Other DBs
NCBI-ProteinID:
AGU48936
UniProt:
T1X8X4
LinkDB
All DBs
Position
1:complement(1960046..1961065)
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AA seq
339 aa
AA seq
DB search
MNKRPLIAAALVALAAAAGGWWYFSRSAAPSDQLVLYGNVDVRQVSLAFNASERVAELAV
REGDHVRAGQVLGRLDTRSLVLRVAQSQARIGVQEQALLRLKTGSRPEELAQAGAQVAAA
QADADLARQQLARLQAIGQTTAGRAVSQQDLDSAQARRKMALAQLDNARKAQQLAVAGPR
KEDIAQAQAQLESARADLALMNHQLAEAELKSPIDAVVRARLLEPGDMASPQRPAFTLAI
TDPKWVRAYVAEPDLGRVRPGQPASVATDSQPGQPIAGKVGYISSVAEFTPKTVQTEELR
SSLVYEIRVMVDDKEDRLRLGMPATVRLQLASSTANGKP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagacctctcattgccgctgccctcgtggcgctggcggccgctgcaggcggc
tggtggtacttcagccgctcggccgcgccgtccgaccagctcgtgctgtacggcaacgtc
gacgtgcgccaggtctcgctcgccttcaatgccagcgagcgcgtggccgaactcgcggtg
cgcgaaggcgaccatgtgcgggccgggcaggtgctgggccggctcgacacccgctcgctc
gtgctgcgcgtggcgcagtcgcaggcgcgcatcggcgtgcaggagcaggcgctgctgcgc
ctgaagaccggcagccgccccgaggaactggcgcaggccggcgcccaggtggccgcggcg
caggccgatgccgaccttgcccggcagcagctcgcgcgcctgcaggccatcggccagacc
acggccggacgcgcggtgagccagcaggacctcgacagtgcgcaggcccgccgcaagatg
gcgctcgcgcagctggacaatgcgcgcaaggcgcagcagctcgcggtggccggcccgcgc
aaggaagacatcgcgcaggcgcaggcccagctcgaatccgcacgcgccgacctcgcgctc
atgaaccaccagctggccgaagccgagctcaagtcgcccatcgacgccgtggtgcgcgcc
cgcctgctcgagcccggcgacatggcttcgccgcagcgcccggccttcacgctggccatc
accgatcccaagtgggtgcgcgcctatgtggccgaacccgacctcggccgcgtgcggccc
ggccagccggccagcgtggccacggacagccagcccggccagccgatcgcgggcaaggtg
ggctacatctcgtcggtcgccgagttcacgcccaagacggtgcagaccgaggagctgcgc
agcagcctggtctacgagatccgcgtgatggtcgacgacaaggaagaccggctgcggctc
ggcatgccggcgaccgtgcggctgcagctcgcttcctccaccgccaacggcaaaccctga
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