Variovorax paradoxus B4: VAPA_1c19980
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Entry
VAPA_1c19980 CDS
T02835
Name
(GenBank) transcriptional regulator, OmpR family
KO
K02483
two-component system, OmpR family, response regulator
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vpd02022
]
VAPA_1c19980
Two-component system [BR:
vpd02022
]
OmpR family
Unclassified
VAPA_1c19980
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
AGU49102
UniProt:
T1X867
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All DBs
Position
1:complement(2115162..2115893)
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AA seq
243 aa
AA seq
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MDHKDRILIVDDDPDIRQLLVDYLARNGFDAVPAASGRELWQVLNKHAVDLVVLDLMLPD
ADGLTLCRDLRAKSNLPVLMLTARGEETDRILGIEMGADDYLVKPFSPRELLARIKGILR
RTRALPPNLKPDTQRCLVFAGWKLDTATRALTGPDGVVTPLSGAEYRLLRILLDHPNRVL
NRDQLVELIHGREAEPYDRAIDVQVSRLRQRLQDDGREARLIKTVRGEGYVLAAAVEGLP
SCT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaccacaaagaccgcatcctgatcgtcgacgatgacccagatatccggcagttgctg
gtggattacctggcccgcaatggtttcgacgccgtgccggccgccagcggccgggaactg
tggcaagtgctgaacaagcacgctgtcgatttggtcgtgctggacctgatgctccccgac
gcggatgggctgacgctgtgccgcgacctgcgcgcgaagtcgaacctgcccgtcttgatg
ctcaccgcgcgcggcgaggagacggatcgcatcctcggcatcgagatgggcgctgacgac
tacctggtcaagccgttcagcccgcgcgagttgctggcacgcatcaaaggcatcctgcgt
cgcacgcgtgcgttgccgcccaacctcaagcccgatacccagcgctgcctggtcttcgcc
ggctggaagctcgacaccgccacccgggcgctcacggggcccgatggcgtggtgacgccg
ttgtcgggtgccgagtaccgcctgctgcgcatcctgctcgatcaccccaaccgggtgctc
aatcgcgatcaactggtggaactgatccatggccgcgaagccgagccttacgaccgcgcc
atcgatgtccaggtgagccgcctgcgccagcgactgcaggacgacggacgcgaagcccgg
ctgatcaagaccgtgcgcggcgaaggctacgtgttggctgctgcggtggagggcttgccg
tcatgcacctga
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