Variovorax paradoxus B4: VAPA_1c20780
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Entry
VAPA_1c20780 CDS
T02835
Name
(GenBank) putative ribulose bisphosphate carboxylase
KO
K01559
3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase [EC:
3.7.1.28
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VAPA_1c20780
Enzymes [BR:
vpd01000
]
3. Hydrolases
3.7 Acting on carbon-carbon bonds
3.7.1 In ketonic substances
3.7.1.28 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase
VAPA_1c20780
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AGU49182
UniProt:
T1X8D1
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All DBs
Position
1:complement(2200613..2201884)
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AA seq
423 aa
AA seq
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MTVTERIRARYLIETPLDPAAVAEVMAGEQSCGTFTRVEGETDALRERARATVDAITELA
PAETPSLPNALLERKGTRGPWRRALVDISFPAANIGANLPTLAATVSGNLYDLGEVTGLR
LESLKLPAAYRTQFEMPRAGIAGTRRTTGVASGALVGTIIKPNVGLSASETAALVARLCA
AGVDFIKDDEVCADPAHAPLAERVPAVMAVVRAHQERTGKHVMVAFNITDETDAMKRHAD
LVEREGGSCVMASLNWCGHSGMQTLRRHTGLALHGHRNGYGALSRHPLLGISFQAYQTLW
RLAGVDHMHVHGLQGKFSQPDSEVIESARDCFTPLTDAADDRVMPAFSSGQWAGTVPATW
AAIGSDDLLFMAGGGILAHPDGAAAGVTSIRQAWSAARAGTALEEAARSAPELARALAFF
GKP
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgactgaacgcatccgcgcgcgctacttgatcgagacgccgctggacccggcc
gccgtggccgaggtgatggccggcgaacaatcgtgcggcaccttcacgcgcgtcgagggc
gagaccgacgcactgcgcgaacgcgcgcgcgccacggtcgacgcgatcaccgagcttgca
ccggccgagacgccgagcctgcccaacgccctgctcgaacgcaagggcacgcgcggcccg
tggcgccgtgcgctggtcgacatctcgtttccggcagcgaacatcggcgccaacctgccg
acgctcgcggccacggtgtcgggcaacctctacgacctgggcgaagtcacgggcctgcgg
ctcgaatcgctgaaactgccggccgcgtaccgcacgcagttcgagatgccgcgcgccggc
atcgcgggcacgcggcgcactacgggcgtggcgagcggcgcgctggtcggcaccatcatc
aagccaaacgtgggcctgtccgccagcgaaaccgccgcgctggtcgcacggctctgcgcc
gcgggcgtcgacttcatcaaggacgacgaggtctgcgccgatcccgcgcatgcgccgctc
gccgagcgcgtgcccgcggtgatggccgtggtgcgcgcccaccaggagcgcaccggcaag
cacgtgatggtggccttcaacatcaccgacgaaaccgatgcgatgaagcggcacgccgac
ctggtcgagcgcgaaggcggatcgtgcgtcatggccagcctcaactggtgcggccattcg
ggcatgcagaccctgcgccgccacaccggcctggcgctgcacggccaccgcaacggctac
ggcgcgctgtcgcgccatccgctgctgggcatttcgttccaggcctatcagacgctctgg
cggctggccggggtcgaccacatgcacgtgcatggcctgcagggcaagttctcgcagccc
gacagcgaagtcatcgaatcggcgcgcgactgcttcacgccgctgaccgatgctgccgac
gaccgcgtgatgccggccttctcgtcgggccagtgggccggcacggtgccggccacctgg
gccgccatcggcagcgacgacctgctcttcatggccggcggcggcatcctcgcgcatccc
gatggcgcggcggccggcgtcaccagcatccgccaggcctggtcggctgcgcgcgccggc
accgcgctggaagaagccgcccgcagcgcgcccgaactggcgcgcgcgctggccttcttc
ggcaagccgtga
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