Variovorax paradoxus B4: VAPA_1c27390
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Entry
VAPA_1c27390 CDS
T02835
Name
(GenBank) transcriptional regulator, AraC family
Organism
vpd
Variovorax paradoxus B4
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Gene cluster
GFIT
Motif
Pfam:
AraC_N
HTH_18
HTH_AraC
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
AGU49836
UniProt:
T1XBH2
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Position
1:complement(2907095..2908087)
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AA seq
330 aa
AA seq
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MPQETPEIAAAIAQPMPLEPELDEARKELVALINRITRGRDGTVETPVAGLQVYCISKPD
GPKHAFATPALGLIAQGSKRIIVGDDIYVYDPMHYLVTSVDLPVCGQVRLTSENEPYLGL
RLELAIDEIGKLIGDEKLPAKANAPASRGMYVNRIGMPVLEPVLRLLRLVETPEDVPIMA
PLIKREIMYRLLVNGEGARLRQIALQDSHTQRVAKAISALRVNYAQSLRIEDMARAVHMS
VSSFHHHFKAVTAMSPLQYQKQLRLQEARRQMLMAGVDVASAAHSVGYESPSQFAREYSR
MFGAPPLRDKRRWLGEAENDALGAGSMQAA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagaaacacccgaaatcgctgccgccattgcccagccgatgccgctggagccc
gaactcgacgaagccaggaaggaactggtggcgctgatcaaccgcatcacgcgcggccgg
gacggcaccgtggaaacgccggtggccggcctgcaggtgtactgcatcagcaagcccgac
ggtcccaagcacgccttcgcaacccctgcgctcgggctgatcgcgcagggctccaagcgg
atcatcgtgggtgacgacatctatgtgtacgaccccatgcactacctggtgacctcggtc
gacctgccggtgtgcggccaggtgcgcctgacgagcgagaacgaaccctacctcggcctg
cggctggagctggcgatcgacgagatcggcaagctcatcggcgacgagaagctgcccgcg
aaggccaatgcgcccgcgtcgcgcggcatgtacgtcaaccgcatcggcatgccggtgctg
gagccggtgctgcggctgctgcggctggtcgagacgcccgaggacgtgccgatcatggcg
ccgctcatcaagcgcgagatcatgtaccgcctgctggtgaacggcgagggcgcgcggctg
cggcagatcgcgctgcaggacagccacacccagcgcgttgccaaggccatcagcgcgctg
cgcgtcaactacgcgcagtcgctgcggatcgaggacatggcgcgcgcagtgcacatgagc
gtgtcgtcgttccaccatcatttcaaggccgtgacggccatgagcccgctgcagtaccag
aagcagctgcgcctgcaggaagcgcgccgccagatgctgatggccggcgtggacgtggcg
agtgcggcgcacagcgtgggctacgagagcccgtcgcagttcgcgcgcgagtacagccgc
atgttcggtgcgccgccgttgcgcgacaagcggcgctggctcggcgaagccgagaacgac
gcgctcggcgcggggtcgatgcaggccgcctga
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