Variovorax paradoxus B4: VAPA_1c29030
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Entry
VAPA_1c29030 CDS
T02835
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase [NADP] Icd
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00020
Citrate cycle (TCA cycle)
vpd00480
Glutathione metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
vpd01230
Biosynthesis of amino acids
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VAPA_1c29030 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VAPA_1c29030 (icd)
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
VAPA_1c29030 (icd)
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
AGU49998
UniProt:
T1XBR9
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All DBs
Position
1:complement(3068872..3070131)
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AA seq
419 aa
AA seq
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MSSYQHIKVPAEGQKITVNADNSLNVPDQPIIPFIEGDGTGLDITPVMLKVVDAAVAKAY
GGKKKIHWMEVYAGEKSTKVYGPDVWLPEETLHAVRDYVVSIKGPLTTPVGGGIRSLNVA
LRQELDLYVCLRPIQYFEGVPSPVREPHKTNMVIFRENSEDIYAGIEFEAESDKAKKLIK
FLQDELGVKKIRFPNTSGIGVKPVSKEGTERLVRKALQYAVDNDKPSVTIVHKGNIMKFT
EGGFRDWAYALAAKEFGAELIDGGPWMKFKNPKTGKEITVKDSIADAFLQQILLRPAEYS
VIATLNLNGDYVSDALAAQVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDYVNPGSEI
LSAEMMLRHMGWTEAADLIISSMEKSIASKKVTYDFARLMDGATQVSCSGFGQVMIDHM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctaccagcacatcaaagtcccggccgaaggccagaagatcacggtcaacgcc
gacaactcgctcaatgtgcctgatcagccgatcattcccttcatcgaaggcgacggcacg
ggtctggacatcaccccggtgatgctcaaggtggtggatgccgcagtggccaaggcctac
ggcggcaagaagaagatccactggatggaagtctatgccggcgaaaagtcgaccaaggtc
tacggccccgacgtctggctgcccgaagaaacgctgcacgccgtgcgcgactacgtggtt
tccatcaagggcccgctgaccacgccggtcggcggcggcatccgctcgctgaacgtcgcg
ctgcgccaggaactcgacctctacgtctgcctgcgccccatccagtatttcgaaggcgtg
cccagcccggtgcgcgagccccacaagaccaacatggtcatcttccgcgagaactcggaa
gacatctacgccggcatcgagttcgaagccgaaagcgacaaggccaagaagctcatcaag
ttcctgcaggacgaactgggcgtcaagaagatccgcttccccaacacttcgggcatcggc
gtcaagcccgtgtcgaaggaaggcaccgagcgcctcgtgcgcaaggcgctgcaatacgct
gtggacaacgacaagcccagcgtcaccatcgtgcacaagggcaacatcatgaagttcacc
gaaggtggcttccgcgactgggcctatgccttggcggccaaggagttcggtgccgaactg
atcgacggcggcccctggatgaagttcaagaatcccaagacgggcaaggaaatcaccgtc
aaggacagcatcgccgacgcattcctgcagcagattctcctgcgccccgcagaatacagc
gtgattgccacgctcaatctgaacggcgactatgtgtccgacgcgctggcggcccaggtg
ggcggcatcggcattgcccccggcgcgaacctgagcgacaccgtcgccatgttcgaagcc
acccacggcacggctcccaagtacgccggcaaggactacgtgaaccccggttccgagatc
ctctcggccgaaatgatgctgcgccacatgggctggaccgaagcggccgacctgatcatc
agctcgatggaaaagtcgatcgccagcaagaaggtcacctatgacttcgcccgcctgatg
gacggcgccacgcaagtgagctgctcgggcttcggccaggtcatgatcgaccacatgtaa
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