Variovorax paradoxus B4: VAPA_1c30980
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Entry
VAPA_1c30980 CDS
T02835
Symbol
cbbL
Name
(GenBank) ribulose bisphosphate carboxylase, large chain CbbL
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00630
Glyoxylate and dicarboxylate metabolism
vpd00710
Carbon fixation in photosynthetic organisms
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
Module
vpd_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VAPA_1c30980 (cbbL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
VAPA_1c30980 (cbbL)
Enzymes [BR:
vpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
VAPA_1c30980 (cbbL)
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AGU50187
UniProt:
T1XB90
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All DBs
Position
1:complement(3269385..3270851)
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AA seq
488 aa
AA seq
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MGNMNEAIQITDAKKRYSAGVLKYAQMGYWDGDYVPKDTDILALFRITPQEGVDAIEAAA
AVAGESSTATWTVVWTDRLTACDMYRAKAYKVEPVPNNPGQYFCYVAYDLSLFEEGSITN
VTASIIGNVFSFKPLKAARLEDMKFPVAYVKTFPGPPTGIVVERERLDKFGRPLLGATTK
PKLGLSGRNYGRVVYEGLRGGLDFMKDDENINSQPFMHWRDRFLFVMDAVNKASAATGEV
KGSYLNVTAGTMEEMYRRAQFAKELGSVIVMVDLVIGYTAIQSMSNWCRQNDMILHLHRA
GHGTYTRQKNHGVSFRVIAKWMRLAGVDHIHAGTAVGKLEGDPMTVQGYYNVCRDTHTKV
DLPRGIYFDQDWGALRKVMPVASGGIHAGQMHQLLDLFGDDVVLQFGGGTIGHPQGIQAG
ATANRVALEAMVLARNEGRDIANEGPQILRDAAKWCTPLAAALDTWGEISFNYASTDTSD
YVPTPSVA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacatgaacgaagcaatccagatcaccgacgccaagaagcgctattcggccggc
gtgctcaagtacgcgcagatgggctactgggacggcgactacgtgcccaaggacacggac
atcctcgcgctcttccgcatcacgccgcaggaaggcgtggacgccatcgaggccgccgct
gcggtggcgggcgaatcgtccaccgccacctggaccgtggtgtggaccgaccgcctcacg
gcctgcgacatgtaccgcgccaaggcctacaaggtcgagccggtgcccaacaacccgggc
cagtacttctgctatgtggcctacgacctctcgctgttcgaggaaggctcgatcaccaac
gtgacggcttccatcatcggcaacgtcttcagcttcaagccgctgaaggccgcgcggctg
gaggacatgaagtttccggtggcctacgtcaagaccttccccggcccgccgaccggcatc
gtggtggagcgcgagcggctcgacaagttcggccggccgctgctgggtgcgaccaccaag
ccgaagctcgggctctcgggccgcaactacggccgcgtggtgtacgaaggcctgcgcggc
gggctcgacttcatgaaggacgacgagaacatcaactcgcaacccttcatgcactggcgt
gaccgcttcctgttcgtgatggacgcggtgaacaaggccagcgctgccaccggtgaggtc
aagggcagctacctgaacgtcacggccggcaccatggaagagatgtaccgccgcgcgcag
ttcgccaaggagctcggctcggtgatcgtgatggtcgacctcgtcatcggctacacggcc
atccagtcgatgagcaactggtgccgccagaacgacatgatcctgcacctgcaccgcgcg
ggccacggcacctacacgcggcagaagaaccacggcgtgagcttccgcgtcatcgcgaag
tggatgcgcctggcgggcgtggaccacatccatgcgggcacggcggtcggcaagctcgag
ggcgatccgatgacggtgcagggctactacaacgtctgccgcgacacgcacaccaaggtc
gacctgccgcgcggcatctacttcgaccaggactggggcgcgctgcgcaaggtgatgccg
gtggcctcgggcggcatccatgccggccagatgcaccagctgctcgacctgttcggcgac
gacgtggtgctgcagttcggcggcggcaccatcggccatccgcaaggcatccaggccggg
gccaccgccaaccgcgtggcgctcgaagccatggttctggcccgcaacgaaggccgcgac
atcgccaacgaggggccgcagatcctgcgcgacgcggccaagtggtgcacgccgctcgcg
gccgcgctcgacacctggggcgagatctccttcaactacgcctccaccgacacctcggac
tacgtgccgacgccgtcggtggcctga
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