Variovorax paradoxus B4: VAPA_1c48170
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Entry
VAPA_1c48170 CDS
T02835
Symbol
ruvA
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VAPA_1c48170 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpd03400
]
VAPA_1c48170 (ruvA)
DNA repair and recombination proteins [BR:
vpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VAPA_1c48170 (ruvA)
RecFOR pathway proteins
VAPA_1c48170 (ruvA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AGU51882
UniProt:
T1XG35
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All DBs
Position
1:complement(5077284..5077856)
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AA seq
190 aa
AA seq
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MIGKLTGILAERNPPQVVVDCNGVGYEVDVPMSTFYNLPGTGERVSLLTHFVVREDAQIL
YGFGTAEERAAFRQLIKISGVGPRTALGLLSGMSVGELAQAITTQELGRLVKIPGIGKKT
AERLLLELKGKLGADIGLPAHAATDAQADILQALVALGYSDKEAALALKALPKDATVSEG
IKLALKALAK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgataggcaaactcaccggcatcctggccgagcgcaacccaccgcaggtggtggtggac
tgcaacggcgtcggctacgaggtcgatgtgccgatgagcacgttctacaacctgcccggc
accggagagcgcgtttcgctgctcacgcacttcgtggtgcgcgaggacgcgcagattctc
tacggtttcggcactgccgaggagcgtgcggcctttcggcaactcatcaagatcagcggc
gtgggcccgcgcaccgcgctcggcctgctgtcgggcatgagcgtgggcgagctggcgcag
gcgatcacgacgcaggaactgggccggctcgtgaagatcccgggcatcggcaagaagacc
gccgagcggctgctgctcgaactcaagggcaagctgggcgccgacatcggcctgcccgcc
catgcggccaccgacgcgcaggccgacatcctgcaggcgctggtcgcgctgggctacagc
gacaaggaagctgcgctggcgctcaaggcgctgcccaaggacgcgacggtgagcgagggg
atcaagctggcgctgaaggcattggcgaaataa
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